RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 FAM71F1Q96KD3 344 aaPredicted RBP10.56□□□□□ -0.72
CCNC-216ENST00000523961 GAL3ST1Q99999 423 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 FN3KRPQ9HA64 309 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 AMBNQ9NP70 447 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 GPR84Q9NQS5 396 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 MRPS18AQ9NVS2 196 aaKnown RBP10.56□□□□□ -0.72
CCNC-216ENST00000523961 DCAF16Q9NXF7 216 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 GNG8Q9UK08 70 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 RHBDD3Q9Y3P4 386 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 MPC1Q9Y5U8 109 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 HSPE1-MOB4S4R3N1 261 aa10.56□□□□□ -0.72
CCNC-216ENST00000523961 YLPM1P49750 1951 aaKnown RBP10.56□□□□□ -0.72
CCNC-216ENST00000523961 ZNF816-ZNF321PA0A0X1KG74 233 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 LOC100289279A0A1B0GTE1 492 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 A8MV72 311 aaPredicted RBP10.55□□□□□ -0.72
CCNC-216ENST00000523961 WBP4O75554 376 aaKnown RBP10.55□□□□□ -0.72
CCNC-216ENST00000523961 IGHV2-70P01814 119 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 ZNF16P17020 682 aaPredicted RBP10.55□□□□□ -0.72
CCNC-216ENST00000523961 CDH15P55291 814 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 ISL1P61371 349 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 LMO4P61968 165 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 BTG1P62324 171 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 ACTA2P62736 377 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 ACTG2P63267 376 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 RIPPLY1Q0D2K3 151 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 TP53I3Q53FA7 332 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 ZBTB37Q5TC79 503 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 PRAMEF6Q5VXH4 476 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 FAM166AQ6J272 317 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 THAP5Q7Z6K1 395 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 CATSPERDQ86XM0 798 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 EGFL6Q8IUX8 553 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 LINC01356Q8N9X3 169 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 SEMA6DQ8NFY4 1073 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 RORBQ92753 470 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 C1orf159Q96HA4 380 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 MICU1Q9BPX6 476 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 SOX7Q9BT81 388 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 ZNF665Q9H7R5 613 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 INPP5EQ9NRR6 644 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 UFSP2Q9NUQ7 469 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 SLC22A13Q9Y226 551 aa10.55□□□□□ -0.72
CCNC-216ENST00000523961 IRGMA1A4Y4 181 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 A6NLC8 198 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 ZNF850A8MQ14 1090 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 B4DSR2 109 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 H0YJX3 145 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 FAM20BO75063 409 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 DHRS3O75911 302 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 FSTL3O95633 263 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
CCNC-216ENST00000523961 TGFAP01135 160 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 IGHA1P01876 353 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 GRPP07492 148 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 MDH2P40926 338 aaKnown RBP10.54□□□□□ -0.72
CCNC-216ENST00000523961 PMELP40967 661 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 HNRNPA0Q13151 305 aaKnown RBP10.54□□□□□ -0.72
CCNC-216ENST00000523961 PRDX4Q13162 271 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 GALEQ14376 348 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 MPPED2Q15777 294 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 SMN1Q16637 294 aaKnown RBP10.54□□□□□ -0.72
CCNC-216ENST00000523961 TMEM155Q4W5P6 130 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 DOK3Q7L591 496 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 KRT74Q7RTS7 529 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 LRRC28Q86X40 367 aaPredicted RBP10.54□□□□□ -0.72
CCNC-216ENST00000523961 ZDHHC23Q8IYP9 409 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 C8orf59Q8N0T1 100 aaPredicted RBP10.54□□□□□ -0.72
CCNC-216ENST00000523961 MUC20Q8N307 709 aaPredicted RBP10.54□□□□□ -0.72
CCNC-216ENST00000523961 SPICQ8N5J4 248 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 OR52I1Q8NGK6 324 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 CNIH3Q8TBE1 160 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 PIGCQ92535 297 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 ITPKCQ96DU7 683 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 HIST1H2AAQ96QV6 131 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 RTL8AQ9BWD3 113 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 VCX3BQ9H321 246 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 ACOXLQ9NUZ1 547 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 UBAP1Q9NZ09 502 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 ENPP5Q9UJA9 477 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 KCNS2Q9ULS6 477 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 PCDHB10Q9UN67 800 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 MYRFQ9Y2G1 1151 aa10.54□□□□□ -0.72
CCNC-216ENST00000523961 A0A1B0GTI1 187 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 A0A1B0GVI7 797 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 DHRS7CA6NNS2 312 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 INAFM1C9JVW0 142 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 J3QLW9 94 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 P2RY10O00398 339 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 LMX1BO60663 402 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 IGHV2-5P01817 119 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 ZNF19P17023 458 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 PSMB10P40306 273 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 RIPPLY3P57055 190 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 OR12D2P58182 307 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 ZMYND11Q15326 602 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 WDR38Q5JTN6 314 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 FDX2Q6P4F2 183 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms