RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 SGK3Q96BR1 496 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 SLAMF6Q96DU3 332 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 KCNJ15Q99712 375 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 EFCAB1Q9HAE3 211 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 CENPMQ9NSP4 180 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 FBLN5Q9UBX5 448 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 COL7A1Q02388 2944 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 TET2Q6N021 2002 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 BTBD17A6NE02 478 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 ANKRD61A6NGH8 418 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 ANKRD30BLA7E2S9 258 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 GYPBP06028 91 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 SPARCP09486 303 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 EEF1B2P24534 225 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 PAX6P26367 422 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 GABRA5P31644 462 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 EFNB2P52799 333 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 GUCA2AQ02747 115 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 MZT1Q08AG7 82 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 HERPUD1Q15011 391 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 DGUOKQ16854 277 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 HCP5Q6MZN7 132 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 PGBD2Q6P3X8 592 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 SLC36A1Q7Z2H8 476 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 CMTM4Q8IZR5 234 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 C8orf46Q8TAG6 207 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 RORBQ92753 470 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 TLNRD1Q9H1K6 362 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 TOR3AQ9H497 397 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 SNTG1Q9NSN8 517 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 ZNF319Q9P2F9 582 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 SAMD4AQ9UPU9 718 aaKnown RBP12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 CAB39Q9Y376 341 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 RHBDD3Q9Y3P4 386 aa12.47□□□□□ -0.41
TRAPPC9-213ENST00000522504 hCG_38984A0A1B0GV85 526 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 H3BUX3 64 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 ZNF593O00488 134 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 GPR37O15354 613 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 TBX1O43435 398 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 XRCC2O43543 280 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 NDUFB3O43676 98 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 CLUP10909 449 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 GRK5P34947 590 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 DDOSTP39656 456 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 TSPAN31Q12999 210 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 FAM189A2Q15884 450 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 ATPAF1Q5TC12 328 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 PRSS45Q7RTY3 260 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 GALNT4Q8N4A0 578 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 SLC37A3Q8NCC5 494 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR2T4Q8NH00 348 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR5R1Q8NH85 324 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 CFHR4Q92496 578 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 C12orf43Q96C57 262 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 REEP6Q96HR9 211 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 PYURFQ96I23 114 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 GAFA1Q96PS6 74 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 CCDC134Q9H6E4 229 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 OPA3Q9H6K4 179 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 HAO2Q9NYQ3 351 aa12.46□□□□□ -0.41
TRAPPC9-213ENST00000522504 PLXNB1O43157 2135 aa12.46□□□□□ -0.42
TRAPPC9-213ENST00000522504 DHRS12A0PJE2 317 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 PAHP00439 452 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 RRM2P31350 389 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 CX3CR1P49238 355 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 GSK3AP49840 483 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 ENTPD1P49961 510 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 UBE2E1P51965 193 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 SMIM11AP58511 58 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 GNGT1P63211 74 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 MXRA7P84157 204 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 TAF13Q15543 124 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 LY6EQ16553 131 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 LRRC10Q5BKY1 277 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 CRIP3Q6Q6R5 217 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 Q6ZTK2 550 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 BEND2Q8NDZ0 799 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 GNPDA2Q8TDQ7 276 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 RPL3LQ92901 407 aaKnown RBP12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 ITPKCQ96DU7 683 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 DMRTB1Q96MA1 342 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 NMNAT2Q9BZQ4 307 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 ELL3Q9HB65 397 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 ZNF391Q9UJN7 358 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 CDH10Q9Y6N8 788 aa12.45□□□□□ -0.42
TRAPPC9-213ENST00000522504 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 NDUFAB1O14561 156 aa12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 PIN1P1O15428 100 aa12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 ALX3O95076 343 aa12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 ANXA2P07355 339 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 CRMP1Q14194 572 aa12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 TIGD6Q17RP2 521 aa12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 TEX30Q5JUR7 227 aa12.44□□□□□ -0.42
TRAPPC9-213ENST00000522504 ZNF788Q6ZQV5 615 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms