RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 UTS2BQ765I0 119 aa18.35■□□□□ 0.53
R3HCC1-208ENST00000522012 OR5AS1Q8N127 324 aa18.35■□□□□ 0.53
R3HCC1-208ENST00000522012 CSNK2A3Q8NEV1 391 aa18.35■□□□□ 0.53
R3HCC1-208ENST00000522012 ITFG2Q969R8 447 aa18.35■□□□□ 0.53
R3HCC1-208ENST00000522012 GFI1Q99684 422 aa18.35■□□□□ 0.53
R3HCC1-208ENST00000522012 V9GY05 133 aa18.35■□□□□ 0.53
R3HCC1-208ENST00000522012 MEGF11A6BM72 1044 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 NOTOA8MTQ0 251 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 GMDSO60547 372 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 NRASP01111 189 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 SELEP16581 610 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 BDKRB2P30411 391 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 GLRXP35754 106 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 KIR2DL3P43628 341 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 NKX6-1P78426 367 aaPredicted RBP18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 PSG7Q13046 419 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 UBE2V2Q15819 145 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 ZNF529Q6P280 563 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 FTMTQ8N4E7 242 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 PAPOLGQ9BWT3 736 aaKnown RBP18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 SLIRPQ9GZT3 109 aaKnown RBP18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 TMEM138Q9NPI0 162 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 KCNN3Q9UGI6 736 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 ATP23Q9Y6H3 246 aa18.34■□□□□ 0.53
R3HCC1-208ENST00000522012 A0A0G2JK05 382 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 ANKRD30BLA7E2S9 258 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 ZNF850A8MQ14 1090 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 ATF1P18846 271 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 PSMD7P51665 324 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 RPS23P62266 143 aaKnown RBP18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 IDNKQ5T6J7 187 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 MBNL2Q5VZF2 373 aaKnown RBP18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 ADAM5Q6NVV9 412 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 SFXN4Q6P4A7 337 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 MOB3CQ70IA8 216 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 NPRL2Q8WTW4 380 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 PPP1R3EQ9H7J1 279 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 CRIM1Q9NZV1 1036 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 PLEKHB1Q9UF11 243 aaPredicted RBP18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 DAPK2Q9UIK4 370 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 POU2F3Q9UKI9 436 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 PMF1-BGLAPU3KQ54 211 aa18.33■□□□□ 0.53
R3HCC1-208ENST00000522012 PCNX1Q96RV3 2341 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 IGKV1-9A0A0C4DH69 117 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 MAGEB3O15480 346 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 LILRA1O75019 489 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 CD3EP07766 207 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 ERCC1P07992 297 aaPredicted RBP18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 HCKP08631 526 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 ALKBH6Q3KRA9 238 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 BEX5Q5H9J7 111 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 GLT8D1Q68CQ7 371 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 TMEM42Q69YG0 159 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 CROCCP3Q8IVE0 287 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 NUP37Q8NFH4 326 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 OR52N4Q8NGI2 321 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 MCFD2Q8NI22 146 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 PIGTQ969N2 578 aa18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 PURGQ9UJV8 347 aaKnown RBP18.33■□□□□ 0.52
R3HCC1-208ENST00000522012 C19orf84I3L1E1 186 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 TIMM8AO60220 97 aaPredicted RBP18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 CST4P01036 141 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 SLC2A2P11168 524 aaPredicted RBP18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 PEX19P40855 299 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 PRDX4Q13162 271 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 ZNF404Q494X3 552 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 HES5Q5TA89 166 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 DDI2Q5TDH0 399 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 PLCXD3Q63HM9 321 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 JAGN1Q8N5M9 183 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 NKAIN3Q8N8D7 197 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 SYNPRQ8TBG9 265 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 TMEM171Q8WVE6 324 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 NKX3-1Q99801 234 aaPredicted RBP18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 CGGBP1Q9UFW8 167 aaPredicted RBP18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 DUSP13Q9UII6 198 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 GPR160Q9UJ42 338 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 RTTNQ86VV8 2226 aa18.32■□□□□ 0.52
R3HCC1-208ENST00000522012 RELNP78509 3460 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 WIPF3A6NGB9 483 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 IQCF6A8MYZ5 107 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 RNF224P0DH78 156 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 AZGP1P25311 298 aaKnown RBP18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 CNN3Q15417 329 aaKnown RBP18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 MSMPQ1L6U9 139 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 TMEM255AQ5JRV8 349 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 TRMT10AQ8TBZ6 339 aaKnown RBP18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 UBASH3BQ8TF42 649 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 AP3S1Q92572 193 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 SPACA5Q96QH8 159 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 PLGRKTQ9HBL7 147 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 CA10Q9NS85 328 aa18.31■□□□□ 0.52
R3HCC1-208ENST00000522012 IFITM5A6NNB3 132 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 ALX3O95076 343 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 CA6P23280 308 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 LRP11Q86VZ4 500 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 PIK3IP1Q96FE7 263 aa18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 C6orf62Q9GZU0 229 aaPredicted RBP18.3■□□□□ 0.52
R3HCC1-208ENST00000522012 NEK6Q9HC98 313 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms