RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 TMIGD3P0DMS9 266 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 KLK2P20151 261 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 TCEA1P23193 301 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ITGA3P26006 1051 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ZNF93P35789 620 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 SELENOPP49908 381 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 LHX2P50458 406 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 EFNB2P52799 333 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 CLDN18P56856 261 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 SPOCK1Q08629 439 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PMPCAQ10713 525 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PPA1Q15181 289 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 RNPS1Q15287 305 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 OR1C1Q15619 314 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 SGCAQ16586 387 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PNLIPRP3Q17RR3 467 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PCGF3Q3KNV8 242 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ZNF260Q3ZCT1 412 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ACTBL2Q562R1 376 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PHYHD1Q5SRE7 291 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 OTPQ5XKR4 325 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 DHRS13Q6UX07 377 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 GLDNQ6ZMI3 551 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ZNF782Q6ZMW2 699 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 SLC16A14Q7RTX9 510 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 YRDCQ86U90 279 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 GLCCI1Q86VQ1 547 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PNLDC1Q8NA58 520 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 OR4D6Q8NGJ1 314 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 GRPEL2Q8TAA5 225 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 KCNG3Q8TAE7 436 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 CCDC107Q8WV48 283 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 GIMAP1Q8WWP7 306 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 HAS2Q92819 552 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PPP1R14AQ96A00 147 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 SEH1LQ96EE3 360 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ZNF799Q96GE5 643 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 PGAM5Q96HS1 289 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 JMJD8Q96S16 334 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 SMAD5Q99717 465 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 FOXB1Q99853 325 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 URM1Q9BTM9 101 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 TTTY12Q9BZ98 90 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 CST11Q9H112 138 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 CGGBP1Q9UFW8 167 aaPredicted RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 POU2F3Q9UKI9 436 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 MCTS1Q9ULC4 181 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ING4Q9UNL4 249 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 TIMM10BQ9Y5J6 103 aa5.86□□□□□ -1.47
CTNNA1-228ENST00000521640 ALPK2Q86TB3 2170 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 TRAV6A0A075B6T7 132 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 IGHV3-15A0A0B4J1V0 119 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 PINLYPA6NC86 204 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 CREBL2O60519 120 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 TRAPPC6AO75865 159 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 KDM4BO94953 1096 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 SYNGR4O95473 234 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 CYB5AP00167 134 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 LIPCP11150 499 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 NAT2P11245 290 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 GTF2F2P13984 249 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 ZNF24P17028 368 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 NAT1P18440 290 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 SDHBP21912 280 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 CBX5P45973 191 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 CCR6P51684 374 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 PRKXP51817 358 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 CLDN15P56746 228 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 CD83Q01151 205 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 UNC119Q13432 240 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 MPPED2Q15777 294 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 LINC00303Q3SY05 128 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 ZNF626Q68DY1 528 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 AWAT2Q6E213 333 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 STEAP1BQ6NZ63 245 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 FAM57BQ71RH2 274 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 BIVMQ86UB2 503 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 GABRG1Q8N1C3 465 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 GALNT16Q8N428 558 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 PAQR4Q8N4S7 273 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 FAM89BQ8N5H3 189 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 DTX3Q8N9I9 347 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 ASCC1Q8N9N2 400 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 TMEM178AQ8NBL3 297 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 STEAP2Q8NFT2 490 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 OR52N4Q8NGI2 321 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 OR56B1Q8NGI3 324 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 OR4C16Q8NGL9 310 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 OR13C9Q8NGT0 318 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 OR1F12Q8NHA8 337 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 FBXO17Q96EF6 278 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 C1orf147Q96MC9 270 aaPredicted RBP5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 SIGLEC12Q96PQ1 595 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 FYTTD1Q96QD9 318 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 PRRT1Q99946 306 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 RBM24Q9BX46 236 aaKnown RBP5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 TM2D1Q9BX74 207 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 IRF2BPLQ9H1B7 796 aa5.85□□□□□ -1.47
CTNNA1-228ENST00000521640 OPA3Q9H6K4 179 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms