RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZNF726A6NNF4 738 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 LRRN3E7EW58 273 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 G3V2T6 193 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CDC42EP2O14613 210 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 IDH3BO43837 385 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OR10H3O60404 316 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 ENTPD5O75356 428 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 MRPL33O75394 65 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 E2F6O75461 281 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 KHDRBS3O75525 346 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 TNFSF13O75888 250 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NXPH2O95156 264 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NDUFB2O95178 105 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 BAG2O95816 211 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 IGHV2-70P01814 119 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CD14P08571 375 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 TSPAN19P0C672 248 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 ADORA3P0DMS8 318 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 SAGP10523 405 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 ANXA8P13928 327 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 IRF2P14316 349 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 ZNF43P17038 809 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PTNP21246 168 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PRKACGP22612 351 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 AHCYP23526 432 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 MPZP25189 248 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 AGTR1P30556 359 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 AQP2P41181 271 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 GPR4P46093 362 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 DAP3P51398 398 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 IST1P53990 364 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CLDN17P56750 224 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 KRTAP10-3P60369 221 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PRPS1P60891 318 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 RPS4XP62701 263 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 RPL18Q07020 188 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PUDPQ08623 228 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 MZT1Q08AG7 82 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 COX10Q12887 443 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PPP1R8Q12972 351 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 TSPAN31Q12999 210 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 RFX4Q33E94 735 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 SLC25A35Q3KQZ1 300 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 FBXL19-AS1Q494R0 122 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 ZBED5Q49AG3 693 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 C1QTNF12Q5T7M4 302 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 LCN1P1Q5VSP4 162 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PRR27Q6MZM9 219 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 FAHD1Q6P587 224 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CLEC18BQ6UXF7 455 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 DPY19L2P2Q6ZN68 376 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 RASSF6Q6ZTQ3 369 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NCCRP1Q6ZVX7 275 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 AAED1Q7RTV5 226 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NUFIP2Q7Z417 695 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NANOGNBQ7Z5D8 188 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 TMEM179BQ7Z7N9 219 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OAFQ86UD1 273 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 MEX3DQ86XN8 651 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 HIPK1Q86Z02 1210 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CCDC71Q8IV32 467 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 TUSC5Q8IXB3 177 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 SPAG16Q8N0X2 631 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 KDM8Q8N371 416 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CLDN22Q8N7P3 220 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CNEP1R1Q8N9A8 125 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 LRRC75AQ8NAA5 344 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 AQP11Q8NBQ7 271 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 RELL2Q8NC24 303 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NPEPL1Q8NDH3 523 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OR10G2Q8NGC3 310 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OR13C3Q8NGS6 347 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OR13C2Q8NGS9 318 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OR6K3Q8NGY3 331 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OR51A7Q8NH64 312 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OR5K1Q8NHB7 308 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 ITLN2Q8WWU7 325 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PYDC1Q8WXC3 89 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 STMN2Q93045 179 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 STARD4Q96DR4 205 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 GPA33Q99795 319 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PKP2Q99959 881 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 OSBPL10Q9BXB5 764 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 DGCR6LQ9BY27 220 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 UCK2Q9BZX2 261 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NDEL1Q9GZM8 345 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 MCCC2Q9HCC0 563 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 KCNJ16Q9NPI9 418 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 INIPQ9NRY2 104 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 TAS2R5Q9NYW4 299 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 PDP1Q9P0J1 537 aaPredicted RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 SEC14L4Q9UDX3 406 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 DAPK2Q9UIK4 370 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 CLEC4AQ9UMR7 237 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 RNF6Q9Y252 685 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 SIGLEC7Q9Y286 467 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 NOSIPQ9Y314 301 aaKnown RBP2.68□□□□□ -1.98
VPS13B-209ENST00000521559 FLVCR1Q9Y5Y0 555 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 U3KQV3 271 aa2.68□□□□□ -1.98
VPS13B-209ENST00000521559 WDR87Q6ZQQ6 2873 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms