RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SFRP5Q5T4F7 317 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 PDZD9Q8IXQ8 264 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 SOX7Q9BT81 388 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 G6PC2Q9NQR9 355 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 TAS2R3Q9NYW6 316 aa8.98□□□□□ -0.97
MCF2-209ENST00000520602 CCDC187A0A096LP49 1063 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 H3BMH7 237 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 WRBO00258 174 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 IL5P05113 134 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 UMODP07911 640 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 UBBP0CG47 229 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 CD96P40200 585 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 UBE2NP61088 152 aaKnown RBP8.97□□□□□ -0.97
MCF2-209ENST00000520602 GK2Q14410 553 aaPredicted RBP8.97□□□□□ -0.97
MCF2-209ENST00000520602 SULF2Q8IWU5 870 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 APH1AQ96BI3 265 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 UQCC2Q9BRT2 126 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 SLC6A15Q9H2J7 730 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 TMEM9BQ9NQ34 198 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 CA10Q9NS85 328 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 KLRC4-KLRK1H3BQV0 150 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 CCL2P13500 99 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 SPINK2P20155 84 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 S100GP29377 79 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 APLNRP35414 380 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 RBP2P50120 134 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 TAS2R31P59538 309 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 ECH1Q13011 328 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 TEX261Q6UWH6 196 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 LIX1LQ8IVB5 337 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 C20orf196Q8IYI0 205 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 FAM109AQ8N4B1 249 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 OR1F12Q8NHA8 337 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 ST8SIA4Q92187 359 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 GUCD1Q96NT3 240 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 ZPBPQ9BS86 351 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 ANGPTL4Q9BY76 406 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 ZNF700Q9H0M5 742 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 U3KQ87 197 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 TPRP12270 2363 aaKnown RBP8.97□□□□□ -0.97
MCF2-209ENST00000520602 A0A0A6YYH2 397 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 C5orf49A4QMS7 147 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 A6NJ64 397 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 RGS13O14921 159 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 NRASP01111 189 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 BTCP35070 178 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 PTGFRP43088 359 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 PPIAP62937 165 aaKnown RBP8.97□□□□□ -0.97
MCF2-209ENST00000520602 SWI5Q1ZZU3 235 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 ZBTB37Q5TC79 503 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 ZNF626Q68DY1 528 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 TMUB2Q71RG4 321 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 SGPP2Q8IWX5 399 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 TMEM104Q8NE00 496 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 MFRPQ9BY79 579 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 SPEF1Q9Y4P9 236 aa8.97□□□□□ -0.97
MCF2-209ENST00000520602 TAS2R46P59540 309 aa8.96□□□□□ -0.97
MCF2-209ENST00000520602 C3AR1Q16581 482 aa8.96□□□□□ -0.97
MCF2-209ENST00000520602 Q5BKY6 102 aa8.96□□□□□ -0.97
MCF2-209ENST00000520602 GPX8Q8TED1 209 aa8.96□□□□□ -0.97
MCF2-209ENST00000520602 INTS12Q96CB8 462 aaKnown RBP8.96□□□□□ -0.97
MCF2-209ENST00000520602 MS4A3Q96HJ5 214 aa8.96□□□□□ -0.97
MCF2-209ENST00000520602 GSX2Q9BZM3 304 aa8.96□□□□□ -0.97
MCF2-209ENST00000520602 OR5H14A6NHG9 310 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 DHRS3O75911 302 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 DHRS2Q13268 280 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 STK11Q15831 433 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 HES3Q5TGS1 186 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 FDX2Q6P4F2 183 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 SLC25A47Q6Q0C1 308 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 PLXDC2Q6UX71 529 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 UNQ6126/PRO20091Q6UXV3 157 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 MEX3BQ6ZN04 569 aaKnown RBP8.96□□□□□ -0.98
MCF2-209ENST00000520602 PRR18Q8N4B5 295 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 OR11H4Q8NGC9 324 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 OR51F2Q8NH61 342 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 C1QTNF6Q9BXI9 259 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 FAM206AQ9NX38 181 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 SEMA5BQ9P283 1151 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 FBXO9Q9UK97 447 aaPredicted RBP8.96□□□□□ -0.98
MCF2-209ENST00000520602 LSM5Q9Y4Y9 91 aaKnown RBP8.96□□□□□ -0.98
MCF2-209ENST00000520602 A6NLC8 198 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 HLA-HP01893 362 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 APOC3P02656 99 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 TPOP07202 933 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 VSIG10L2P0DP72 767 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 ZNF16P17020 682 aaPredicted RBP8.96□□□□□ -0.98
MCF2-209ENST00000520602 SLC10A1Q14973 349 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 LGALSLQ3ZCW2 172 aaPredicted RBP8.96□□□□□ -0.98
MCF2-209ENST00000520602 CCDC36Q8IYA8 594 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 FNDC9Q8TBE3 224 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 PAQR8Q8TEZ7 354 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 CPNE4Q96A23 557 aaPredicted RBP8.96□□□□□ -0.98
MCF2-209ENST00000520602 VRK1Q99986 396 aaPredicted RBP8.96□□□□□ -0.98
MCF2-209ENST00000520602 B3GAT1Q9P2W7 334 aa8.96□□□□□ -0.98
MCF2-209ENST00000520602 DOCK7Q96N67 2140 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 DENND4AQ7Z401 1863 aa8.95□□□□□ -0.98
MCF2-209ENST00000520602 HPP00738 406 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms