RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ARSJQ5FYB0 599 aaPredicted RBP10.03□□□□□ -0.8
PCDHGB4-201ENST00000519479 FAM209AQ5JX71 171 aa10.03□□□□□ -0.8
PCDHGB4-201ENST00000519479 ZNF362Q5T0B9 420 aaPredicted RBP10.03□□□□□ -0.8
PCDHGB4-201ENST00000519479 B3GNTL1Q67FW5 361 aaPredicted RBP10.03□□□□□ -0.8
PCDHGB4-201ENST00000519479 ACOT7LQ6ZUV0 252 aa10.03□□□□□ -0.8
PCDHGB4-201ENST00000519479 ZNRF4Q8WWF5 429 aa10.03□□□□□ -0.8
PCDHGB4-201ENST00000519479 RRNAD1Q96FB5 475 aaKnown RBP10.03□□□□□ -0.8
PCDHGB4-201ENST00000519479 PSMB6P28072 239 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 CSF2RBP32927 897 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 AGFG1P52594 562 aaKnown RBP10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 PLA2G7Q13093 441 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 DHRS2Q13268 280 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 IKZF1Q13422 519 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 BEND4Q6ZU67 534 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 BHLHE23Q8NDY6 225 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 TERB2Q8NHR7 220 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 SLC25A38Q96DW6 304 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 IFT22Q9H7X7 185 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 ZNF175Q9Y473 711 aa10.02□□□□□ -0.8
PCDHGB4-201ENST00000519479 IGHV5-10-1A0A0J9YXX1 117 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 CD46P15529 392 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 RPS4XP62701 263 aaKnown RBP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 TGFBR3Q03167 851 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 NR2C2APQ86WQ0 139 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 ARHGEF39Q8N4T4 335 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 GVQW1Q8N7I0 195 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 SCGB1C1Q8TD33 95 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 DNTTIP1Q9H147 329 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 NARFLQ9H6Q4 476 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 PILRBQ9UKJ0 227 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 SHISA7A6NL88 538 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 RRP8O43159 456 aaKnown RBP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 MED6O75586 246 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 MT-CO3P00414 261 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 IFNA5P01569 189 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 TUBG1P23258 451 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 PAN3Q58A45 887 aaKnown RBP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 AKR1C8PQ5T2L2 129 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 AVPI1Q5T686 147 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 SNIP1Q8TAD8 396 aaKnown RBP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 SECTM1Q8WVN6 248 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 PSMF1Q92530 271 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 ZNF2Q9BSG1 426 aaPredicted RBP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 NMNAT2Q9BZQ4 307 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 NELFAQ9H3P2 528 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 BCO1Q9HAY6 547 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 CACNA1EQ15878 2313 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 FAM221AA4D161 298 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 IFNA2P01563 188 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 IGKV3-11P04433 115 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 CD96P40200 585 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 CLDN15P56746 228 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 FOXK1P85037 733 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 COL19A1Q14993 1142 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 CLLU1Q5K131 121 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 FAM74A1Q5RGS3 127 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 FBXW12Q6X9E4 464 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 SSX9Q7RTT3 188 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 ZSCAN4Q8NAM6 433 aaPredicted RBP10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 REEP6Q96HR9 211 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 CRLF2Q9HC73 371 aa10.02□□□□□ -0.81
PCDHGB4-201ENST00000519479 MCRIP1C9JLW8 97 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 TO15178 435 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 ANGPTL7O43827 346 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 NRASP01111 189 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 CCL4P13236 92 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 CPN1P15169 458 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 PLXDC2Q6UX71 529 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 SLC38A9Q8NBW4 561 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 OR5L1Q8NGL2 311 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 OR51F2Q8NH61 342 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 OR6X1Q8NH79 312 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 NECAP2Q9NVZ3 263 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 TRBV5-5A0A0J9YX44 114 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 TTLL8A6PVC2 850 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 SLC34A2O95436 690 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 KISS1Q15726 138 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 WIPI1Q5MNZ9 446 aaPredicted RBP10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 UNQ9370/PRO34162Q6UXP9 181 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 RNF141Q8WVD5 230 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 PP6455Q8WZ26 134 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 INTS12Q96CB8 462 aaKnown RBP10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 KCNIP1Q9NZI2 227 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 A0A096LPE4 126 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 A0A1W2PPZ6 126 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 TSTD3H0UI37 97 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 LYPD3O95274 346 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 PNPP00491 289 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 RAB6AP20340 208 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 PEA15Q15121 130 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 CEACAM16Q2WEN9 425 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 FAM122BQ7Z309 247 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 GALNT16Q8N428 558 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 CNEP1R1Q8N9A8 125 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 RNF133Q8WVZ7 376 aa10.01□□□□□ -0.81
PCDHGB4-201ENST00000519479 KCNE4Q8WWG9 221 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms