RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 RAB3BP20337 219 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 KITLGP21583 273 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 MAS1LP35410 378 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 GPX6P59796 221 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 RPL23AP62750 156 aaKnown RBP1.93□□□□□ -2.1
LINC01088-211ENST00000515597 SP4Q02446 784 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 LOXL1Q08397 574 aaPredicted RBP1.93□□□□□ -2.1
LINC01088-211ENST00000515597 GK3PQ14409 553 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 DMC1Q14565 340 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 ZSCAN26Q16670 478 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 ZNF684Q5T5D7 378 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 CASC1Q6TDU7 716 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 RGS9BPQ6ZS82 235 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 CALHM1Q8IU99 346 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 LGI3Q8N145 548 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 PDIK1LQ8N165 341 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 ZCCHC7Q8N3Z6 543 aaKnown RBP1.93□□□□□ -2.1
LINC01088-211ENST00000515597 HSD17B11Q8NBQ5 300 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 ZBTB18Q99592 522 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 SMR3AQ99954 134 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 DDX19AQ9NUU7 478 aaKnown RBP1.93□□□□□ -2.1
LINC01088-211ENST00000515597 SUN2Q9UH99 717 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 SLC7A8Q9UHI5 535 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 NUP50Q9UKX7 468 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 GINS2Q9Y248 185 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 TMED5Q9Y3A6 229 aa1.93□□□□□ -2.1
LINC01088-211ENST00000515597 TET2Q6N021 2002 aaPredicted RBP1.93□□□□□ -2.1
LINC01088-211ENST00000515597 SHANK1Q9Y566 2161 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 PLXND1Q9Y4D7 1925 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 SGK1O00141 431 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 CDC7O00311 574 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 RP2O75695 350 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 UQCRFS1P1P0C7P4 283 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 GOLGA8HP0CJ92 632 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 CRYBB2P43320 205 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 SSR4P51571 173 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 ACTR1AP61163 376 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 YWHAGP61981 247 aaKnown RBP eCLIP1.92□□□□□ -2.1
LINC01088-211ENST00000515597 ZNF33AQ06730 810 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 IRF4Q15306 451 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 SMUG1Q53HV7 270 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 PHYHD1Q5SRE7 291 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 DNLZQ5SXM8 178 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 HES3Q5TGS1 186 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 ARL9Q6T311 187 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 NTM-AS1Q6ZSK4 140 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 KRTAP13-1Q8IUC0 172 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 LIX1Q8N485 282 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 OR52P1PQ8NH57 321 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 COQ8AQ8NI60 647 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 RBMXL1Q96E39 390 aaKnown RBP1.92□□□□□ -2.1
LINC01088-211ENST00000515597 L3HYPDHQ96EM0 354 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 NARS2Q96I59 477 aaKnown RBP1.92□□□□□ -2.1
LINC01088-211ENST00000515597 ZNF681Q96N22 645 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 SERPINB12Q96P63 405 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 DOK1Q99704 481 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 SPNS1Q9H2V7 528 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 MARCOQ9UEW3 520 aaPredicted RBP1.92□□□□□ -2.1
LINC01088-211ENST00000515597 GOLT1BQ9Y3E0 138 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 CSPG4Q6UVK1 2322 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 KNL1Q8NG31 2342 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 PKD1L1Q8TDX9 2849 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 HYDINQ4G0P3 5121 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 ANK3Q12955 4377 aaKnown RBP1.92□□□□□ -2.1
LINC01088-211ENST00000515597 STAB1Q9NY15 2570 aa1.92□□□□□ -2.1
LINC01088-211ENST00000515597 COL6A5A8TX70 2615 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 DCHS2Q6V1P9 2916 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 VPS13CQ709C8 3753 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 IGLV3-12A0A075B6K2 115 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 IGHV1OR15-9A0A0B4J2B8 117 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 FOXE1O00358 373 aaPredicted RBP1.91□□□□□ -2.1
LINC01088-211ENST00000515597 EEDO75530 441 aaKnown RBP1.91□□□□□ -2.1
LINC01088-211ENST00000515597 IL4P05112 153 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 KRT7P08729 469 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 UBTFL6P0CB48 400 aaPredicted RBP1.91□□□□□ -2.1
LINC01088-211ENST00000515597 C1GALT1C1LP0DN25 315 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 WARSP23381 471 aaKnown RBP1.91□□□□□ -2.1
LINC01088-211ENST00000515597 CASP14P31944 242 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 TPMTP51580 245 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 ARFIP1P53367 373 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 CACNG7P62955 275 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 ACTG2P63267 376 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 BST2Q10589 180 aaKnown RBP1.91□□□□□ -2.1
LINC01088-211ENST00000515597 ZMYND11Q15326 602 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 RGNQ15493 299 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 PTPN20Q4JDL3 420 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 KRTAP13-2Q52LG2 175 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 PPM1LQ5SGD2 360 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 PRR9Q5T870 116 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 CENPPQ6IPU0 288 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 PRMT9Q6P2P2 845 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 SDR9C7Q8NEX9 313 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 GPR151Q8TDV0 419 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 RNF139Q8WU17 664 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 NTAN1Q96AB6 310 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 SEH1LQ96EE3 360 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 CAMK2N2Q96S95 79 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 GON7Q9BXV9 100 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 ULBP2Q9BZM5 246 aa1.91□□□□□ -2.1
LINC01088-211ENST00000515597 C8orf33Q9H7E9 229 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms