RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 SLC29A1Q99808 456 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 ADAT1Q9BUB4 502 aaKnown RBP6.93□□□□□ -1.3
NEDD4-210ENST00000513957 TRIM36Q9NQ86 728 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 INPP5EQ9NRR6 644 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 FAM118AQ9NWS6 357 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 FAM206AQ9NX38 181 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 GFOD1Q9NXC2 390 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 DNAJC27Q9NZQ0 273 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 IKZF2Q9UKS7 526 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 PPP1R3CQ9UQK1 317 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 KLHDC2Q9Y2U9 406 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 HSPE1-MOB4S4R3N1 261 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 HIVEP2P31629 2446 aa6.93□□□□□ -1.3
NEDD4-210ENST00000513957 DOCK11Q5JSL3 2073 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 MALRD1Q5VYJ5 2156 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 TMEM269A0A1B0GVZ9 245 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 IRGMA1A4Y4 181 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 ANXA2P2A6NMY6 339 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 B4DSR2 109 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 LOC110117498-PIK3R3F6TDL0 507 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 H0YAE9 185 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 MLNRO43193 412 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 IGLV3-1P01715 115 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 IGHV4-31P0DP07 118 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 SLC2A1P11166 492 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 IRF2P14316 349 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 GABRB1P18505 474 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 COL8A2P25067 703 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 MTNR1BP49286 362 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 IL5RAQ01344 420 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 KRTAP1-1Q07627 177 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 RAB40BQ12829 278 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 PDCD1Q15116 288 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 OR8G1Q15617 311 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 KCNJ8Q15842 424 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 ZIK1Q3SY52 487 aaPredicted RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 TMEM155Q4W5P6 130 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 OGFRL1Q5TC84 451 aaPredicted RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 FAM166AQ6J272 317 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 BCDIN3DQ7Z5W3 292 aaKnown RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 ENTHD1Q8IYW4 607 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 OR8H2Q8N162 312 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 SPICQ8N5J4 248 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 BHLHE23Q8NDY6 225 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 OR10AD1Q8NGE0 317 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 OR56B2PQ8NGI1 322 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 OR2AE1Q8NHA4 323 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 RHOXF1Q8NHV9 184 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 ITLN1Q8WWA0 313 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 CCL17Q92583 94 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 GTF3AQ92664 365 aaKnown RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 SGK3Q96BR1 496 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 VCX3BQ9H321 246 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 GCM1Q9NP62 436 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 TMEM106BQ9NUM4 274 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 MRPS18AQ9NVS2 196 aaKnown RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 LPAR3Q9UBY5 353 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 COPS3Q9UNS2 423 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 RPL36Q9Y3U8 105 aaKnown RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 WIPI2Q9Y4P8 454 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 MPC1Q9Y5U8 109 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 SNX5Q9Y5X3 404 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 NPTNQ9Y639 398 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 R4GMQ9 66 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 ABCA2Q9BZC7 2435 aa6.92□□□□□ -1.3
NEDD4-210ENST00000513957 TEP1Q99973 2627 aaKnown RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 NSD1Q96L73 2696 aaPredicted RBP6.92□□□□□ -1.3
NEDD4-210ENST00000513957 ZNF816-ZNF321PA0A0X1KG74 233 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 A0A1W2PQL4 384 aaPredicted RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 METTL15A6NJ78 407 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 TMEM210A6NLX4 147 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 A8MV72 311 aaPredicted RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 LYNX1G3V0Z9 82 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 H0YJX3 145 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 J3QRE1 110 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 DLGAP1O14490 977 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 CDC14BO60729 498 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ENTPD6O75354 484 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 SRSF10O75494 262 aaKnown RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 DHRS3O75911 302 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 FADS2O95864 444 aaKnown RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 CST4P01036 141 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 LYNX1P0DP58 116 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 DBTP11182 482 aaKnown RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ZNF12P17014 697 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 MDH2P40926 338 aaKnown RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 MAP2K3P46734 347 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 GSK3AP49840 483 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 CDH15P55291 814 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ISL1P61371 349 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 BTG1P62324 171 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ELF3P78545 371 aaPredicted RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ZNF91Q05481 1191 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 CNN3Q15417 329 aaKnown RBP6.91□□□□□ -1.3
NEDD4-210ENST00000513957 KLHL22Q53GT1 634 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ZNF684Q5T5D7 378 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 BCL2L15Q5TBC7 163 aa6.91□□□□□ -1.3
NEDD4-210ENST00000513957 ZNF691Q5VV52 312 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms