RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TNFAIP6P98066 277 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 SLC3A1Q07837 685 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 ALKBH1Q13686 389 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 OR8B8Q15620 311 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 PRAMEF6Q5VXH4 476 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF676Q8N7Q3 588 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 OR51A4Q8NGJ6 313 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 OR13C5Q8NGS8 318 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 OR52N1Q8NH53 320 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 YIPF5Q969M3 257 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 MRPL48Q96GC5 212 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 Q96MF0 132 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 OR2V2Q96R30 315 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 OR5M11Q96RB7 305 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 SLC30A2Q9BRI3 323 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 FGF23Q9GZV9 251 aaPredicted RBP8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 RASSF4Q9H2L5 321 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 MS4A5Q9H3V2 200 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 RGCCQ9H4X1 137 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 DUSP21Q9H596 190 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 OPA3Q9H6K4 179 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 SAP30LQ9HAJ7 183 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 CHCHD3Q9NX63 227 aaKnown RBP8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 DCAF16Q9NXF7 216 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 TPRKBQ9Y3C4 175 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 ARID1AO14497 2285 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 MYO9AB2RTY4 2548 aa8.32□□□□□ -1.08
TOPBP1-209ENST00000513818 TANC2Q9HCD6 1990 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 IGHV4-30-2A0A087WSY4 118 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 ACOD1A6NK06 481 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 OR4C45A6NMZ5 311 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 ANKRD30BLA7E2S9 258 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF850A8MQ14 1090 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 DHRS3O75911 302 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 PAX1P15863 534 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 TUBG1P23258 451 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 CFL1P23528 166 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 EFNA4P52798 201 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 PRDX4Q13162 271 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 MED21Q13503 144 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 IRF3Q14653 427 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 CDK5R1Q15078 307 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 OR8G1Q15617 311 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 MOGQ16653 247 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 CLEC12BQ2HXU8 276 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 TMEM95Q3KNT9 176 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 ZMAT1Q5H9K5 638 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 CEP78Q5JTW2 689 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 RBM48Q5RL73 367 aaKnown RBP8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 TMPRSS11AQ6ZMR5 421 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 LRRC75A-AS1Q8N1F1 130 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 NANOGP1Q8N7R0 232 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF485Q8NCK3 441 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 OR14K1Q8NGZ2 314 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 ZNF420Q8TAQ5 688 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 PIGCQ92535 297 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 RGP1Q92546 391 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 MYDGFQ969H8 173 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 MEGF10Q96KG7 1140 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 FOXC2Q99958 501 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 TUBG2Q9NRH3 451 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 GPR173Q9NS66 373 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 CYSLTR2Q9NS75 346 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 TMEM100Q9NV29 134 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 CGGBP1Q9UFW8 167 aaPredicted RBP8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 PIGLQ9Y2B2 252 aa8.31□□□□□ -1.08
TOPBP1-209ENST00000513818 MAST4O15021 2626 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 TRBV2A0A0J9YWF9 115 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 ZFPL1O95159 310 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 ERCC1P07992 297 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 UBCP0CG48 685 aaKnown RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 ACHEP22303 614 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 CCL1P22362 96 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 COL8A2P25067 703 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 MAP2K3P46734 347 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 SOX2P48431 317 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 WNT4P56705 351 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 CSNK2BP67870 215 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 MED22Q15528 200 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 PCGF3Q3KNV8 242 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 FDX2Q6P4F2 183 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 DOK3Q7L591 496 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 KCTD20Q7Z5Y7 419 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 MOGAT3Q86VF5 341 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 MAPK1IP1LQ8NDC0 245 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 SEMA6DQ8NFY4 1073 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 OR13G1Q8NGZ3 307 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 UBASH3BQ8TF42 649 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 NPRL2Q8WTW4 380 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 TSEN15Q8WW01 171 aaKnown RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 HPSE2Q8WWQ2 592 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 NEU4Q8WWR8 484 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 ADAT3Q96EY9 351 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 MND1Q9BWT6 205 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 CXXC4Q9H2H0 198 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 NARFLQ9H6Q4 476 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 PLEKHA1Q9HB21 404 aa8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 BARX1Q9HBU1 254 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-209ENST00000513818 TRIM36Q9NQ86 728 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms