RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 RFX4Q33E94 735 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 TCTEX1D4Q5JR98 221 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 GLYATQ6IB77 296 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 PTCHD4Q6ZW05 846 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 PGAP1Q75T13 922 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 C8orf46Q8TAG6 207 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 SPTSSAQ969W0 71 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 SLCO4A1Q96BD0 722 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 DCTN5Q9BTE1 182 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 MYLK2Q9H1R3 596 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
RNF4-218ENST00000513284 SPAG4Q9NPE6 437 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 C1orf123Q9NWV4 160 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 NDUFAF4Q9P032 175 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 PRPF19Q9UMS4 504 aaKnown RBP9.05□□□□□ -0.96
RNF4-218ENST00000513284 B9D1Q9UPM9 204 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 CSMD3Q7Z407 3707 aa9.05□□□□□ -0.96
RNF4-218ENST00000513284 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 IDH3BO43837 385 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 GADD45GO95257 159 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 SELLP14151 372 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 GGT2P36268 569 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 CDKN2AP42771 156 aaKnown RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 BMXP51813 675 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 SPIBQ01892 262 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 OR8G1Q15617 311 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 LRRC75BQ2VPJ9 315 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 WDR38Q5JTN6 314 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 RPL13AP3Q6NVV1 102 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 CORO6Q6QEF8 472 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 RNF144BQ7Z419 303 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 FAM216BQ8N7L0 139 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 SLC26A10Q8NG04 563 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 OR52L1Q8NGH7 329 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 RCC1LQ96I51 464 aaKnown RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 OR5M11Q96RB7 305 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 NKX3-1Q99801 234 aaPredicted RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 ELAC2Q9BQ52 826 aaKnown RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 IFT27Q9BW83 186 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 NPFFR1Q9GZQ6 430 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 NSRP1Q9H0G5 558 aaKnown RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 FAM234AQ9H0X4 552 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 OR52D1Q9H346 318 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 OPA3Q9H6K4 179 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 RPRD1BQ9NQG5 326 aaKnown RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 DCAF13Q9NV06 445 aaKnown RBP9.04□□□□□ -0.96
RNF4-218ENST00000513284 ABCD2Q9UBJ2 740 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 LHFPL6Q9Y693 200 aa9.04□□□□□ -0.96
RNF4-218ENST00000513284 IGLV1-36A0A0B4J1U3 117 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 TRBV4-1A0A0J9YWV2 114 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 LCE6AA0A183 80 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 GGT3PA6NGU5 568 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 M0R135 149 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 ACOT8O14734 319 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 GMDSO60547 372 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 GRPP07492 148 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 ACSM4P0C7M7 580 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 NCK1P16333 377 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 RAB13P51153 203 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 PSME3P61289 254 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 TRAP1Q12931 704 aaKnown RBP9.03□□□□□ -0.96
RNF4-218ENST00000513284 AANATQ16613 207 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 MEP1BQ16820 701 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 SLC18B1Q6NT16 456 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 TSEN54Q7Z6J9 526 aaKnown RBP9.03□□□□□ -0.96
RNF4-218ENST00000513284 CMTM4Q8IZR5 234 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 OR6V1Q8N148 313 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 OR51G2Q8NGK0 314 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 OR4K13Q8NH42 304 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 ZNF799Q96GE5 643 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 MAP6Q96JE9 813 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 DHRS1Q96LJ7 313 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 TSSK2Q96PF2 358 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 NMNAT3Q96T66 252 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 CDCA4Q9BXL8 241 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 MAGEL2Q9UJ55 1249 aa9.03□□□□□ -0.96
RNF4-218ENST00000513284 CD300LBA8K4G0 201 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 SNX3O60493 162 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 TFF1P04155 84 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 HIST1H1CP16403 213 aaKnown RBP9.02□□□□□ -0.97
RNF4-218ENST00000513284 FAHP16930 419 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 PRDX6P30041 224 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 GRK5P34947 590 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 BLCAPP62952 87 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 SLC35A2P78381 396 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 TAF13Q15543 124 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 PCK2Q16822 640 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 CFAP77Q6ZQR2 320 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 WDR86Q86TI4 376 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 ZBTB46Q86UZ6 589 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 LINC00346Q8IVM7 164 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 DYNAPQ8N1N2 210 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 LINC00471Q8N535 108 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 OR5T2Q8NGG2 359 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 OR2T4Q8NH00 348 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 GNPDA2Q8TDQ7 276 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 PYURFQ96I23 114 aa9.02□□□□□ -0.97
RNF4-218ENST00000513284 ADAT1Q9BUB4 502 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms