RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 TCRBV16S1A1N1A0A5B0 115 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 M0QZQ0 153 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 GEMIN2O14893 280 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 ZNF264O43296 627 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 PRKRAO75569 313 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 ABLIM3O94929 683 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 PTHLHP12272 177 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 ALOX5APP20292 161 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 CNN1P51911 297 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 FAAP20Q6NZ36 180 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 RFLNAQ6ZTI6 216 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 MOB3CQ70IA8 216 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 RNF113BQ8IZP6 322 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 APOOQ9BUR5 198 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 DNAJB11Q9UBS4 358 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 UQCR10Q9UDW1 63 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 TRAPPC2LQ9UL33 140 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 CBLCQ9ULV8 474 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 CHST2Q9Y4C5 530 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 MYADML2A6NDP7 307 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 B4DEV8 164 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 DIRC3C9JPN6 131 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 GPR75O95800 540 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 CD1CP29017 333 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 MDH2P40926 338 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 RAG2P55895 527 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 ZNF626Q68DY1 528 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 C6orf15Q6UXA7 325 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 RHNO1Q9BSD3 238 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 MOKQ9UQ07 419 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 MFSD2BA6NFX1 497 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 PCMT1P22061 227 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 SNRPGP62308 76 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 TRA2BP62995 288 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 PRDX1Q06830 199 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 TMEM211Q6ICI0 200 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 KMT5CQ86Y97 462 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 FAM71CQ8NEG0 241 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 OR2M3Q8NG83 312 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 OR4B1Q8NGF8 309 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 OR1L3Q8NH93 324 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 HSD17B8Q92506 261 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 HGDQ93099 445 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 MS4A7Q9GZW8 240 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 NDRG4Q9ULP0 352 aaKnown RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 RP1P56715 2156 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 P2RY10O00398 339 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 KLK10O43240 276 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 FZD6O60353 706 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 TUSC2O75896 110 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 BMI1P35226 326 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 SLC19A1P41440 591 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 GABREP78334 506 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 PMP22Q01453 160 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 CD300CQ08708 224 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 SPEM2Q0P670 501 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 BTLAQ7Z6A9 289 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 SPNS2Q8IVW8 549 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 OR11L1Q8NGX0 322 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 SLC22A12Q96S37 553 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 DMRTA2Q96SC8 542 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 VN1R3Q9BXE9 311 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 CDCA4Q9BXL8 241 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 PBX4Q9BYU1 374 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 DLL4Q9NR61 685 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 CGGBP1Q9UFW8 167 aaPredicted RBP7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 ZNF831Q5JPB2 1677 aa7.92□□□□□ -1.14
LIMCH1-218ENST00000513024 TRAV36DV7A0A075B6V5 113 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 A0A1W2PN81 502 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 CRYM-AS1A6NIL9 109 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 LMX1BO60663 402 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 AGFG2O95081 481 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 CNIH1O95406 144 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 RNF224P0DH78 156 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 ZNF93P35789 620 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 CHRNA7P36544 502 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 ZNF133P52736 654 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 RUNX2Q13950 521 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 LTC4SQ16873 150 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 FAM78BQ5VT40 261 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 GLDNQ6ZMI3 551 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 PARS2Q7L3T8 475 aaKnown RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 LSRQ86X29 649 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 LINC00346Q8IVM7 164 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 OR5M1Q8NGP8 315 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 NDFIP1Q9BT67 221 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 LPAR3Q9UBY5 353 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 ZC3H12DA2A288 527 aaKnown RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 FIGNL2A6NMB9 653 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 HMSDA8MTL9 139 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 PTP4A3O75365 173 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 B3GALT4O96024 378 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 CYB5R3P00387 301 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 CA2P00918 260 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 PRSS1P07477 247 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 TMIGD3P0DMS9 266 aaPredicted RBP7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 EPXP11678 715 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 CTSSP25774 331 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 MMP15P51511 669 aa7.91□□□□□ -1.14
LIMCH1-218ENST00000513024 ERVS71-1P61550 626 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms