RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 MYCNOSP40205 109 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 IFNAR2P48551 515 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 CCL23P55773 120 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 PPP1CAP62136 330 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 PSMD5Q16401 504 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF829Q3KNS6 432 aaPredicted RBP0.34□□□□□ -2.36
PDGFC-208ENST00000512711 CMC1Q7Z7K0 106 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 LYPD6Q86Y78 171 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 SPATA4Q8NEY3 305 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 OR4M2Q8NGB6 313 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 ENKURQ8TC29 256 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 DYNLL2Q96FJ2 89 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 BTN2A3PQ96KV6 586 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 DERL3Q96Q80 235 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 TOLLIPQ9H0E2 274 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 BEX1Q9HBH7 125 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 FAM60AQ9NP50 221 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 INIPQ9NRY2 104 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 RGS18Q9NS28 235 aa0.34□□□□□ -2.36
PDGFC-208ENST00000512711 CCDC59Q9P031 241 aaKnown RBP0.34□□□□□ -2.36
PDGFC-208ENST00000512711 CAB39Q9Y376 341 aaPredicted RBP0.34□□□□□ -2.36
PDGFC-208ENST00000512711 COL4A2P08572 1712 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 SHANK3Q9BYB0 1731 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 NME4O00746 187 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 SLC9A3R1O14745 358 aaPredicted RBP0.33□□□□□ -2.36
PDGFC-208ENST00000512711 RAD1O60671 282 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 PRB4P10163 310 aaPredicted RBP0.33□□□□□ -2.36
PDGFC-208ENST00000512711 GABRG2P18507 467 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 PCK1P35558 622 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 LGALS7P47929 136 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 RAB7AP51149 207 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 IFITM3Q01628 133 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 SELENBP1Q13228 472 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 NAB1Q13506 487 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 TRAM2Q15035 370 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 C6orf99Q4VX62 202 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 TPTE2P1Q5T6R2 138 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 TMEM236Q5W0B7 351 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 KCTD16Q68DU8 428 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 REEP3Q6NUK4 255 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 IQCKQ8N0W5 287 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 EIF1ADQ8N9N8 165 aaKnown RBP0.33□□□□□ -2.36
PDGFC-208ENST00000512711 DNAAF3Q8N9W5 541 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 ACMSDQ8TDX5 336 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 CAPSLQ8WWF8 208 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 PIGUQ9H490 435 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 SND1-IT1Q9HBX3 110 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 HYPKQ9NX55 129 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 SLC39A1Q9NY26 324 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 PSMC3IPQ9P2W1 217 aaPredicted RBP0.33□□□□□ -2.36
PDGFC-208ENST00000512711 STX18Q9P2W9 335 aaKnown RBP0.33□□□□□ -2.36
PDGFC-208ENST00000512711 CES1P1Q9UKY3 287 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF443Q9Y2A4 671 aaPredicted RBP0.33□□□□□ -2.36
PDGFC-208ENST00000512711 AMMECR1Q9Y4X0 333 aaPredicted RBP0.33□□□□□ -2.36
PDGFC-208ENST00000512711 HES2Q9Y543 173 aa0.33□□□□□ -2.36
PDGFC-208ENST00000512711 MYBPHLA2RUH7 354 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 S1PR2O95136 353 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 SEC11BP0C7V7 166 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF24P17028 368 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 PBLDP30039 288 aaPredicted RBP0.32□□□□□ -2.36
PDGFC-208ENST00000512711 APLNRP35414 380 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 IL24Q13007 206 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 GPM6BQ13491 265 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 HSP90AB3PQ58FF7 597 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 MFSD14CQ5VZR4 134 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 SLC8B1Q6J4K2 584 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 RNASEKQ6P5S7 137 aaKnown RBP0.32□□□□□ -2.36
PDGFC-208ENST00000512711 METAP1DQ6UB28 335 aaPredicted RBP0.32□□□□□ -2.36
PDGFC-208ENST00000512711 NAA40Q86UY6 237 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 PDPNQ86YL7 162 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 LRRC8AQ8IWT6 810 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 MSRB3Q8IXL7 192 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 ZCCHC7Q8N3Z6 543 aaKnown RBP0.32□□□□□ -2.36
PDGFC-208ENST00000512711 UBAC2Q8NBM4 344 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 OR10W1Q8NGF6 305 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 KCNG3Q8TAE7 436 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 ZNF625Q96I27 306 aaPredicted RBP0.32□□□□□ -2.36
PDGFC-208ENST00000512711 PEBP4Q96S96 227 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 TXNDC17Q9BRA2 123 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 TMEM38AQ9H6F2 299 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 AGPAT4Q9NRZ5 378 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 ISY1Q9ULR0 285 aaKnown RBP0.32□□□□□ -2.36
PDGFC-208ENST00000512711 SLC17A4Q9Y2C5 497 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 ICOSQ9Y6W8 199 aa0.32□□□□□ -2.36
PDGFC-208ENST00000512711 KMT2DO14686 5537 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 SETD1AO15047 1707 aaKnown RBP0.31□□□□□ -2.36
PDGFC-208ENST00000512711 A6NDN8 102 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 C9JVG2 144 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 FFAR1O14842 300 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 CLOCKO15516 846 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 PSCAO43653 123 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 OXTP01178 125 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 TRGV3P03979 118 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 PFN2P35080 140 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 COILP38432 576 aaPredicted RBP0.31□□□□□ -2.36
PDGFC-208ENST00000512711 SLC1A1P43005 524 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 RGS6P49758 472 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 LIPEQ05469 1076 aa0.31□□□□□ -2.36
PDGFC-208ENST00000512711 KLHL40Q2TBA0 621 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms