RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 NKX2-1P43699 371 aaPredicted RBP4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 RPS21P63220 83 aaKnown RBP4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 MVKQ03426 396 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 CD47Q08722 323 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR8G1Q15617 311 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 TAB1Q15750 504 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 FAM214AQ32MH5 1076 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 PLET1Q6UQ28 207 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 PQLC2Q6ZP29 291 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC16A13Q7RTY0 426 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 DTX1Q86Y01 620 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 CMTM1Q8IZ96 169 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 PNPLA1Q8N8W4 532 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR1K1Q8NGR3 316 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR1B1Q8NGR6 318 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 FBXO25Q8TCJ0 367 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZFP90Q8TF47 636 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 NEIL2Q969S2 332 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 PDCD10Q9BUL8 212 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 CCDC32Q9BV29 185 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 NXF5Q9H1B4 397 aaKnown RBP4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 IKZF5Q9H5V7 419 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 NIPAL2Q9H841 368 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 SPAG4Q9NPE6 437 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 B4GALT7Q9UBV7 327 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 PCYOX1Q9UHG3 505 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 PILRBQ9UKJ0 227 aa4.4□□□□□ -1.7
TRAPPC11-208ENST00000511955 CACNA1EQ15878 2313 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 ANKRD36A6QL64 1941 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRAV8-7A0A075B6U6 113 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRBV9A0A0B4J1U6 114 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 A0A0G2JND7 137 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 KIR2DS1A0A191URI9 304 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 CCDC182A6NF36 153 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 C5orf58C9J3I9 102 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 AP4M1O00189 453 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 TCF21O43680 179 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SSNA1O43805 119 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 ANXA9O76027 345 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 CA1P00915 261 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 WNT1P04628 370 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 F13BP05160 661 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 HOXC4P09017 264 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 GP9P14770 177 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SPNP16150 400 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 MATN1P21941 496 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 CD38P28907 300 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 RPL13AP40429 203 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 DEFA1P59665 94 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 DEFA3P59666 94 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 CKS1BP61024 79 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 KIR2DS1Q14954 304 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SURF2Q15527 256 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 TAL2Q16559 108 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 HLA-DQA1Q5Y7H0 255 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 RTL6Q6ICC9 239 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC25A47Q6Q0C1 308 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SMARCD3Q6STE5 483 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM205Q6UW68 189 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 UNQ6126/PRO20091Q6UXV3 157 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF782Q6ZMW2 699 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 Q6ZSR6 202 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC29A4Q7RTT9 530 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 GLT6D1Q7Z4J2 308 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 GOLGA7Q7Z5G4 137 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 GALNT10Q86SR1 603 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SNX29P2Q8IUI4 249 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 ADAD2Q8NCV1 583 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 MDS2Q8NDY4 140 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 NFAM1Q8NET5 270 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 IL17DQ8TAD2 202 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 PLPPR1Q8TBJ4 325 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 PPP3R2Q96LZ3 170 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF488Q96MN9 340 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 GPR78Q96P69 363 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 FCRL5Q96RD9 977 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF382Q96SR6 550 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC6A7Q99884 636 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 ABHD14AQ9BUJ0 271 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 COMMD4Q9H0A8 199 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 FBXO6Q9NRD1 293 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 SNX11Q9Y5W9 270 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRPM6Q9BX84 2022 aa4.4□□□□□ -1.71
TRAPPC11-208ENST00000511955 CXorf51AA0A1B0GTR3 108 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 H7C2Y5 167 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SIRPB1O00241 398 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR7A17O14581 309 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ARPC1BO15143 372 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OIP5O43482 229 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ATP6AP2O75787 350 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 WISP1O95388 367 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 RPLP0P05388 317 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CST2P09228 141 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 MUC1P15941 1255 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 PVALBP20472 110 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 FGF9P31371 208 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CX3CR1P49238 355 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 PGGT1BP53609 377 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 GNG3P63215 75 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SRYQ05066 204 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms