RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 DEFB108BQ8NET1 73 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OR1M1Q8NGA1 313 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 CHPT1Q8WUD6 406 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 STARD4Q96DR4 205 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ZNF701Q9NV72 531 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 KCNE3Q9Y6H6 103 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 PRKNO60260 465 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM106CPP0CH98 169 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 MSX2P35548 267 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 RBMXP38159 391 aaKnown RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 GMFBP60983 142 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 KCNMB1Q16558 191 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 HIKESHIQ53FT3 197 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ZNF362Q5T0B9 420 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 STEAP3Q658P3 488 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OR2T2Q6IF00 324 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ZNF774Q6NX45 483 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 CLEC9AQ6UXN8 241 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OR2W3Q7Z3T1 314 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 SIAH3Q8IW03 269 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OR51D1Q8NGF3 324 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 DMRTA2Q96SC8 542 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 NPFFR1Q9GZQ6 430 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ATG5Q9H1Y0 275 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 PLAC1Q9HBJ0 212 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 AUP1Q9Y679 476 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 A0A0B4J203 849 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 SHISA8B8ZZ34 492 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 GASTP01350 101 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OPN1MWP04001 364 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OPN1MW2P0DN77 364 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OPN1MW3P0DN78 364 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ARSBP15848 533 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ZNF121P58317 390 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 MPV17LQ2QL34 196 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 TMEM155Q4W5P6 130 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 CD300LFQ8TDQ1 290 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 PHB2Q99623 299 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ABHD6Q9BV23 337 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 PRSS50Q9UI38 385 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 V9GY05 133 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 TEX13DA0A0J9YY54 714 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ANKRD34BA5PLL1 514 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 C17orf100A8MU93 164 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 MED6O75586 246 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 RBBP9O75884 186 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 SLC2A5P22732 501 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 MLLT11Q13015 90 aaPredicted RBP8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 SAXO1Q8IYX7 474 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 OR1L6Q8NGR2 347 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 TMEM231Q9H6L2 316 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 GPR84Q9NQS5 396 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 ST6GALNAC2Q9UJ37 374 aa8.44□□□□□ -1.06
POLR2J3-215ENST00000511313 RFPL3SP0C7P2 107 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 TNFRSF1BP20333 461 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 VWA1Q6PCB0 445 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 HAGHLQ6PII5 290 aaPredicted RBP8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 NPRL2Q8WTW4 380 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM216AQ8WUB2 273 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 ZNF69Q9UC07 566 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 KCNAB3O43448 404 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 PLATP00750 562 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 ASAH2BP0C7U1 165 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 SOX18P35713 384 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 SCAND1P57086 179 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 EFNB3Q15768 340 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 TP53I3Q53FA7 332 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 ZNF691Q5VV52 312 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 ZNF773Q6PK81 442 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 LILRB1Q8NHL6 650 aaPredicted RBP8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 RPS4Y2Q8TD47 263 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 C11orf24Q96F05 449 aaPredicted RBP8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 TSPAN32Q96QS1 320 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 UQCC2Q9BRT2 126 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 DEPPQ9NTK1 212 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 MAP1BP46821 2468 aaKnown RBP8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 TMEM129A0AVI4 362 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 XPNPEP2O43895 674 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 PTGFRP43088 359 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 SELPLGQ14242 412 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 STAC2Q6ZMT1 411 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 DGAT2L6Q6ZPD8 337 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 PPP1R14BQ96C90 147 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 GABARAPL3Q9BY60 117 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 KCNIP2Q9NS61 270 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 VNN3Q9NY84 501 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 RALYQ9UKM9 306 aaKnown RBP8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 DTX4Q9Y2E6 619 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 PTPRSQ13332 1948 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 ASXL3Q9C0F0 2248 aa8.43□□□□□ -1.06
POLR2J3-215ENST00000511313 LOC107986453A0A1B0GWG9 222 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A10PA6NDY2 464 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A18PA6NE21 464 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A16PA6NEW6 464 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A20PA6NIJ5 464 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A8PA6NJQ4 464 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A7PA6NKC0 464 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A22PA8MWA6 464 aa8.42□□□□□ -1.06
POLR2J3-215ENST00000511313 FAM90A12PA8MX19 464 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms