RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MIOXQ9UGB7 285 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 HCRTO43612 131 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 SLC19A1P41440 591 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 Q6ZPB1 254 aaPredicted RBP7.6□□□□□ -1.19
HTT-208ENST00000510626 MED25Q71SY5 747 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 SSX8Q7RTT4 187 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 KCNE4Q8WWG9 221 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 BOD1Q96IK1 185 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 CLCF1Q9UBD9 225 aa7.6□□□□□ -1.19
HTT-208ENST00000510626 WNK3Q9BYP7 1800 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 TNFRSF10CO14798 259 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 SEMG1P04279 462 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 AMTP48728 403 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 NR0B2Q15466 257 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 TMEM123Q8N131 208 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 PRRX2Q99811 253 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 DEFA4P12838 97 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 SQSTM1Q13501 440 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 C20orf24Q9BUV8 137 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 CHST2Q9Y4C5 530 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 HSBP1O75506 76 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 F13BP05160 661 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 IL24Q13007 206 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 OR8G2PQ6IF36 304 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 PRR27Q6MZM9 219 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 MORN4Q8NDC4 146 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 OR4S1Q8NGB4 309 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 NPAS1Q99742 590 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 PPP6CO00743 305 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 SEC11BP0C7V7 166 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 NQO2P16083 231 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 EN2P19622 333 aaPredicted RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 HOXD9P28356 352 aaPredicted RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 HIST3H3Q16695 136 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 RAB6CQ53S08 254 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 H0YIG0 161 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 PCMT1P22061 227 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 C9orf62Q8N4C0 152 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 MYOFQ9NZM1 2061 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 C5orf52A6NGY3 159 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 H7C1C5 153 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 FRS3O43559 492 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 NRASP01111 189 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 HRASP01112 189 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 KRASP01116 189 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 SNRPEP62304 92 aaKnown RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 SMIM21Q3B7S5 101 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 SLC16A12Q6ZSM3 486 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 AAED1Q7RTV5 226 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 GPR87Q9BY21 358 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 SLC6A12P48065 614 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 ZNF528Q3MIS6 628 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 RBM14Q96PK6 669 aaKnown RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 AUNIPQ9H7T9 357 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 UQCC1Q9NVA1 299 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 NAT8Q9UHE5 227 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 SH3BGRL2Q9UJC5 107 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 HS3ST3A1Q9Y663 406 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 ELLP55199 621 aaPredicted RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 HLA-DRB3P79483 266 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 RIF1Q5UIP0 2472 aaKnown RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 PRR18Q8N4B5 295 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 TERTO14746 1132 aaKnown RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 GALR2O43603 387 aaPredicted RBP7.59□□□□□ -1.19
HTT-208ENST00000510626 SERF2P84101 59 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 KHDC3LQ587J8 217 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 OR2T10Q8NGZ9 312 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 GPR62Q9BZJ7 368 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 GNG4P50150 75 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 CARD18P57730 90 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 FAM3CQ92520 227 aa7.59□□□□□ -1.19
HTT-208ENST00000510626 C7orf66A4D0T2 115 aa7.59□□□□□ -1.2
HTT-208ENST00000510626 HEPACAM2A8MVW5 462 aa7.59□□□□□ -1.2
HTT-208ENST00000510626 INHBBP09529 407 aa7.59□□□□□ -1.2
HTT-208ENST00000510626 CSNK1G2P78368 415 aa7.59□□□□□ -1.2
HTT-208ENST00000510626 DSC1Q08554 894 aa7.59□□□□□ -1.2
HTT-208ENST00000510626 METRNLQ641Q3 311 aa7.59□□□□□ -1.2
HTT-208ENST00000510626 TRBV11-1A0A0K0K1C0 115 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 PPM1DO15297 605 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 HOXC5Q00444 222 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 TMEM81Q6P7N7 255 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 HLA-DQB1P01920 261 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 TCL1AP56279 114 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 RUNX3Q13761 415 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 TCTN3Q6NUS6 607 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 NCBP2LA6PVI3 153 aaKnown RBP7.58□□□□□ -1.2
HTT-208ENST00000510626 ELNP15502 786 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 TMEM52BQ4KMG9 183 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 USP54Q70EL1 1684 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 G6PCP35575 357 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 C1orf174Q8IYL3 243 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 IP6K3Q96PC2 410 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 MACROD1Q9BQ69 325 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 PYCARD-AS1I3L0S3 204 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 HIST1H1BP16401 226 aaKnown RBP7.58□□□□□ -1.2
HTT-208ENST00000510626 HIST1H1CP16403 213 aaKnown RBP7.58□□□□□ -1.2
HTT-208ENST00000510626 RXFP4Q8TDU9 374 aa7.58□□□□□ -1.2
HTT-208ENST00000510626 ECM29Q5VYK3 1845 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms