RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SH2D5Q6ZV89 423 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 GLCCI1Q86VQ1 547 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM156Q8N614 296 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR4K2Q8NGD2 314 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR13A1Q8NGR1 328 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR4Q3Q8NH05 313 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TM4SF19Q96DZ7 209 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 FOPNLQ96NB1 174 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 KLF16Q9BXK1 252 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 MRPL20Q9BYC9 149 aaKnown RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SLC25A51Q9H1U9 297 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TPK1Q9H3S4 243 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TRAV8-4A0A0B4J246 113 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 A0A1W2PQ67 120 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 E9PLD3 99 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 XPNPEP2O43895 674 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ORC5O43913 435 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TYROBPO43914 113 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CLDN11O75508 207 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 YIF1AO95070 293 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 P01737 135 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ACAA1P09110 424 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PSKH1P11801 424 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 NAGAP17050 411 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ELK3P41970 407 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CRISP1P54107 249 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 DCDC1P59894 354 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SLC7A9P82251 487 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 RIPPLY1Q0D2K3 151 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 NFATC4Q14934 902 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TBR1Q16650 682 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SLC36A2Q495M3 483 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SLC25A53Q5H9E4 307 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 DTX2Q86UW9 622 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 METTL27Q8N6F8 245 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PCNPQ8WW12 178 aaKnown RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SNX18Q96RF0 628 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 LPAR4Q99677 370 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CALHM2Q9HA72 323 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PNRC2Q9NPJ4 139 aaKnown RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ELOVL2Q9NXB9 296 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 GNPTGQ9UJJ9 305 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 MOKQ9UQ07 419 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 hCG_38984A0A1B0GV85 526 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MEGF11A6BM72 1044 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 C5orf58C9J3I9 102 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CXCR6O00574 342 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 KCNK2O95069 426 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CDS2O95674 445 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TSPAN19P0C672 248 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SLC35G6P0C7Q6 338 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PRKACGP22612 351 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 NUTF2P61970 127 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 Q6ZNB5 142 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 C3orf62Q6ZUJ4 267 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 OR56B4Q8NH76 319 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 BLNKQ8WV28 456 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PTH2Q96A98 100 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SIGLEC10Q96LC7 697 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MBOAT4Q96T53 435 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PDFQ9HBH1 243 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SLC52A3Q9NQ40 469 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HEY1Q9Y5J3 304 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 GABRPO00591 440 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ZNHIT1O43257 154 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SPRY2O43597 315 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 DBIP07108 87 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MYOD1P15172 320 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 RPL26P61254 145 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CFHR3Q02985 330 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 FABP9Q0Z7S8 132 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SP5Q6BEB4 398 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SUMO4Q6EEV6 95 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 FAM199XQ6PEV8 388 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 UBALD2Q8IYN6 164 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF680Q8NEM1 530 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PITX2Q99697 317 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MAP1LC3CQ9BXW4 147 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 NRN1Q9NPD7 142 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SCML1Q9UN30 329 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 RPL26L1Q9UNX3 145 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 OR5K3A6NET4 321 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TRMUO75648 421 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 S100A8P05109 93 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TFAP2AP05549 437 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 ARSBP15848 533 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CSKP41240 450 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 GSK3BP49841 420 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CCR6P51684 374 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 OR10A3P58181 314 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HSF1Q00613 529 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 HES1Q14469 280 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 EIF4HQ15056 248 aaKnown RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 DUSP6Q16828 381 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 CYP51A1Q16850 503 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 SYT6Q5T7P8 510 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 PMS2CLQ68D20 193 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 TNFAIP8L2Q6P589 184 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-209ENST00000508871 GALNT10Q86SR1 603 aa3.45□□□□□ -1.86
NEDD4-209ENST00000508871 MYPOPQ86VE0 399 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms