RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 FOXRED1Q96CU9 486 aaPredicted RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 TMEM41AQ96HV5 264 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 C1orf147Q96MC9 270 aaPredicted RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 ALKBH3Q96Q83 286 aaPredicted RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 ALX4Q9H161 411 aaPredicted RBP12.74□□□□□ -0.37
DDX41-208ENST00000507955 PFDN2Q9UHV9 154 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 VSIG4Q9Y279 399 aa12.74□□□□□ -0.37
DDX41-208ENST00000507955 ARID1AO14497 2285 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 LNP1A1A4G5 178 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 IGHV3-9P01782 118 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 PMP2P02689 132 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 MELTFP08582 738 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 MSR1P21757 451 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 MPLP40238 635 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 GUCA1AP43080 201 aaPredicted RBP12.73□□□□□ -0.37
DDX41-208ENST00000507955 B3GALT5-AS1P59052 145 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 BEST3Q8N1M1 668 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 C12orf45Q8N5I9 185 aaPredicted RBP12.73□□□□□ -0.37
DDX41-208ENST00000507955 STEAP2Q8NFT2 490 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 OR2AE1Q8NHA4 323 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 LPAR5Q9H1C0 372 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 NELFAQ9H3P2 528 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 PLEK2Q9NYT0 353 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 FREM1Q5H8C1 2179 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 MED13Q9UHV7 2174 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 BET1O15155 118 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 DHHO43323 396 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 CXCL13O43927 109 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 HPP00738 406 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 DHRS2Q13268 280 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 RAB11FIP2Q7L804 512 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 MAFIPQ8WZ33 124 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 ZNF845Q96IR2 970 aaPredicted RBP12.73□□□□□ -0.37
DDX41-208ENST00000507955 ULBP2Q9BZM5 246 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 ZNF407Q9C0G0 2248 aa12.73□□□□□ -0.37
DDX41-208ENST00000507955 DSPP15924 2871 aaKnown RBP12.72□□□□□ -0.37
DDX41-208ENST00000507955 A0A087WZY1 265 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 LOC102725191A0A1B0GVB3 256 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 OR14I1A6ND48 311 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 CRTAPO75718 401 aaPredicted RBP12.72□□□□□ -0.37
DDX41-208ENST00000507955 RAD51DO75771 328 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 P04436 131 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 CD96P40200 585 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 TMEM50BP56557 158 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 CLDN15P56746 228 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 GMFBP60983 142 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 RAC1P63000 192 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 SSBP1Q04837 148 aaKnown RBP12.72□□□□□ -0.37
DDX41-208ENST00000507955 UBE2V2Q15819 145 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 ZNF239Q16600 458 aaKnown RBP12.72□□□□□ -0.37
DDX41-208ENST00000507955 ACER2Q5QJU3 275 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 CRIP3Q6Q6R5 217 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 NAXEQ8NCW5 288 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 OR10R2Q8NGX6 335 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 OR14K1Q8NGZ2 314 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 MRPS24Q96EL2 167 aaKnown RBP12.72□□□□□ -0.37
DDX41-208ENST00000507955 HES7Q9BYE0 225 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 CRLF2Q9HC73 371 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 FOXJ2Q9P0K8 574 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 PRELID1Q9Y255 219 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 DNAJC13O75165 2243 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 CCDC187A0A096LP49 1063 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 TMEM14DPA8MWL7 114 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 BPNT1O95861 308 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 RAB6AP20340 208 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 KCNMB1Q16558 191 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 LRRC37A5PQ49AS3 106 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 ZNF546Q86UE3 836 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 TMEM54Q969K7 222 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 PIGTQ969N2 578 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 SEC22AQ96IW7 307 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 PIGQQ9BRB3 760 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 SCPEP1Q9HB40 452 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 SESN1Q9Y6P5 492 aa12.72□□□□□ -0.37
DDX41-208ENST00000507955 DOCK7Q96N67 2140 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 OR2AT4A6NND4 320 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 SULT1C2O00338 296 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 SNAPC5O75971 98 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 ACP1P24666 158 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 HGFACQ04756 655 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 RNASE10Q5GAN6 216 aaKnown RBP12.71□□□□□ -0.37
DDX41-208ENST00000507955 C6orf15Q6UXA7 325 aaPredicted RBP12.71□□□□□ -0.37
DDX41-208ENST00000507955 RHOUQ7L0Q8 258 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
DDX41-208ENST00000507955 GGNQ86UU5 652 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 ADAD2Q8NCV1 583 aaKnown RBP12.71□□□□□ -0.37
DDX41-208ENST00000507955 OR52H1Q8NGJ2 320 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 ST8SIA2Q92186 375 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 EDEM2Q9BV94 578 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 FN3KRPQ9HA64 309 aa12.71□□□□□ -0.37
DDX41-208ENST00000507955 FOXD3Q9UJU5 478 aaPredicted RBP12.71□□□□□ -0.37
DDX41-208ENST00000507955 EP300Q09472 2414 aaPredicted RBP12.71□□□□□ -0.37
DDX41-208ENST00000507955 LRRC3CA6NJW4 275 aa12.71□□□□□ -0.38
DDX41-208ENST00000507955 STMND1H3BQB6 276 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms