RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 TEX13CA0A0J9YWL9 993 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 SNRPGP15A8MWD9 76 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 VSTM5A8MXK1 200 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 GSTZ1O43708 216 aaPredicted RBP6.96□□□□□ -1.3
SCN1A-207ENST00000507401 CRYAAP02489 173 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 BGLAPP02818 100 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 CBR1P16152 277 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 GSTM3P21266 225 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 AHCYP23526 432 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 S100PP25815 95 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 EPHA2P29317 976 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 AQP1P29972 269 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 ACVR1BP36896 505 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 VEGFCP49767 419 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 SPIBQ01892 262 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 GPR176Q14439 515 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 OPCMLQ14982 345 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 LGALSLQ3ZCW2 172 aaPredicted RBP6.96□□□□□ -1.3
SCN1A-207ENST00000507401 HIKESHIQ53FT3 197 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 TEX30Q5JUR7 227 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 ELFN2Q5R3F8 820 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 CFAP77Q6ZQR2 320 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 Q71RC1 249 aaPredicted RBP6.96□□□□□ -1.3
SCN1A-207ENST00000507401 LINGO2Q7L985 606 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 SHFQ7M4L6 423 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 OAFQ86UD1 273 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 UEVLDQ8IX04 471 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 SPAG16Q8N0X2 631 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 OR6V1Q8N148 313 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 GPR137CQ8N3F9 429 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 OR52N1Q8NH53 320 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 MCHR1Q99705 422 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 WFDC6Q9BQY6 131 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF251Q9BRH9 671 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 WACQ9BTA9 647 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 HDHD2Q9H0R4 259 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 RNF167Q9H6Y7 350 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 GPR35Q9HC97 309 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 REV1Q9UBZ9 1251 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 MLXQ9UH92 298 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 ATP23Q9Y6H3 246 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 CSPG4Q6UVK1 2322 aa6.96□□□□□ -1.3
SCN1A-207ENST00000507401 ABCA2Q9BZC7 2435 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 IGHV1-18A0A0C4DH31 117 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 LINC00854A0A1B0GVQ3 168 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 SLC22A23A1A5C7 686 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 RAB19A4D1S5 217 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF726A6NNF4 738 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 KIAA1324LA8MWY0 1029 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-207ENST00000507401 L7N2F9 121 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 SULT1C2O00338 296 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 PLPP3O14495 311 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 PDCD5O14737 125 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 PRODHO43272 600 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 TRAF3IP2O43734 574 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-207ENST00000507401 SSNA1O43805 119 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 SCO1O75880 301 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 UBL3O95164 117 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 GADD45GO95257 159 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 IGKV3-15P01624 115 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 IGLV1-44P01699 117 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 TCRBP04435 133 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 IFNW1P05000 195 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 IL5P05113 134 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 NPR2P20594 1047 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 PAX6P26367 422 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ARR3P36575 388 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 IFNGR2P38484 337 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 MNDAP41218 407 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 MMP15P51511 669 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 EFNA4P52798 201 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ARF1P84077 181 aaKnown RBP6.95□□□□□ -1.3
SCN1A-207ENST00000507401 LGALS3BPQ08380 585 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 SPOCK1Q08629 439 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ZP4Q12836 540 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 MPPED2Q15777 294 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 MST1LQ2TV78 715 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ENTPD8Q5MY95 495 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 BCL2L15Q5TBC7 163 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 B3GLCTQ6Y288 498 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF600Q6ZNG1 722 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF627Q7L945 461 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ZER1Q7Z7L7 766 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 LHFPL3Q86UP9 236 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 C20orf196Q8IYI0 205 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 TMEM123Q8N131 208 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 GPR32P1Q8NGA4 272 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 OR10H5Q8NGA6 315 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 OR4F15Q8NGB8 312 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 OR8D4Q8NGM9 314 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 OR6T1Q8NGN1 323 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 SGK3Q96BR1 496 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 PHYHIPLQ96FC7 376 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ALKBH3Q96Q83 286 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ATF6BQ99941 703 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 THAP7Q9BT49 309 aaPredicted RBP6.95□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF426Q9BUY5 554 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 TSSK6Q9BXA6 273 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 CACNG6Q9BXT2 260 aa6.95□□□□□ -1.3
SCN1A-207ENST00000507401 POLR2J3Q9H1A7 115 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms