RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ZNF3P17036 446 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 ZNF121P58317 390 aaPredicted RBP9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 GNGT1P63211 74 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 MICBQ29980 383 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 MICAQ29983 383 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 C11orf91Q3C1V1 193 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 KLHL12Q53G59 568 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 PDLIM3Q53GG5 364 aaPredicted RBP9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 OR2T5Q6IEZ7 315 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 WDR82Q6UXN9 313 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 VMO1Q7Z5L0 202 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 OR2T29Q8NH02 315 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 TEX47Q8TBZ9 253 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 TBC1D15Q8TC07 691 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 RNF133Q8WVZ7 376 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 DYRK2Q92630 601 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 SEH1LQ96EE3 360 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 INTS14Q96SY0 518 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 PAPOLGQ9BWT3 736 aaKnown RBP9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 DGCR6LQ9BY27 220 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 SP140LQ9H930 580 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 BRD7Q9NPI1 651 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 CMC2Q9NRP2 79 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 ZNF319Q9P2F9 582 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 PKD1L1Q8TDX9 2849 aa9.52□□□□□ -0.89
HMGCS1-204ENST00000507293 A0A1B0GVI7 797 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 ACOT8O14734 319 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 TIPRLO75663 272 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 APOC1P02654 83 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 CFL1P23528 166 aaKnown RBP9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 GSTT1P30711 240 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 GNALP38405 381 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 GSK3AP49840 483 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 GYS2P54840 703 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 RPL15P61313 204 aaKnown RBP9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 CDONQ4KMG0 1287 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 MIDNQ504T8 468 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 LCN8Q6JVE9 175 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 LDLRAD3Q86YD5 345 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 PIP4P2Q8N4L2 257 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 IQCF1Q8N6M8 205 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 OR10G2Q8NGC3 310 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 OTULINQ96BN8 352 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 PGAM5Q96HS1 289 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 CITED1Q99966 193 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 NIPSNAP1Q9BPW8 284 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 OR10A2Q9H208 303 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 CNTD2Q9H8S5 307 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 ONECUT1Q9UBC0 465 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 RHBDD3Q9Y3P4 386 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 KPTNQ9Y664 436 aa9.51□□□□□ -0.89
HMGCS1-204ENST00000507293 B2RBV5 119 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 NDUFB3O43676 98 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 GLCEO94923 617 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 H2BFMP0C1H6 154 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 SELLP14151 372 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 AMY2BP19961 511 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 OPRL1P41146 370 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 NAA10P41227 235 aaPredicted RBP9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 IER3P46695 156 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 GMFBP60983 142 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 PRB3Q04118 309 aaPredicted RBP9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 IKZF1Q13422 519 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 FAM98BQ52LJ0 330 aaKnown RBP9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 STUMQ69YW2 141 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 SHFQ7M4L6 423 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 SLC36A1Q7Z2H8 476 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 PIGWQ7Z7B1 504 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 DHFR2Q86XF0 187 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 TIGD4Q8IY51 512 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 LY6G5BQ8NDX9 201 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 CSNK2A3Q8NEV1 391 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 OR52H1Q8NGJ2 320 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 CCT8L2Q96SF2 557 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 MICU1Q9BPX6 476 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 RTL8AQ9BWD3 113 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 TLNRD1Q9H1K6 362 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 OR51V1Q9H2C8 321 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 SEMA6AQ9H2E6 1030 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 MUC13Q9H3R2 512 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 SIRT7Q9NRC8 400 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 SNTG1Q9NSN8 517 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 PRPF19Q9UMS4 504 aaKnown RBP9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 RNF114Q9Y508 228 aa9.5□□□□□ -0.89
HMGCS1-204ENST00000507293 A0A1W2PRD5 423 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 A0A1W2PRF3 423 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 A0A1W2PRM7 423 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 NKX6-3A6NJ46 265 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 ANXA2P2A6NMY6 339 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 H3BN98 237 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 CDIPTO14735 213 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 SELENOFO60613 162 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 TFF1P04155 84 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 MNAT1P51948 309 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 DLX1P56177 255 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 IL5RAQ01344 420 aa9.49□□□□□ -0.89
HMGCS1-204ENST00000507293 MS4A2Q01362 244 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms