RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ADRA2AP08913 450 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 PRKACBP22694 351 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 MPV17P39210 176 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 KRTAP10-9P60411 292 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 GNG3P63215 75 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 TNFAIP6P98066 277 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-205ENST00000506880 IRF3Q14653 427 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 CDK5R1Q15078 307 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 CNN3Q15417 329 aaKnown RBP7.2□□□□□ -1.26
PDGFC-205ENST00000506880 OR8G1Q15617 311 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 HFEQ30201 348 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 CEACAM21Q3KPI0 293 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 FAM90A1Q86YD7 464 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF573Q86YE8 665 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 Q8IYB0 196 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 MUC20Q8N307 709 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-205ENST00000506880 PARP16Q8N5Y8 322 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 BPIFB6Q8NFQ5 453 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 OR56B2PQ8NGI1 322 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 OR5D14Q8NGL3 314 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 OR11L1Q8NGX0 322 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 OR5AK2Q8NH90 309 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 GPR148Q8TDV2 347 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 FAM168AQ92567 244 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 C12orf43Q96C57 262 aaKnown RBP7.2□□□□□ -1.26
PDGFC-205ENST00000506880 SYT3Q9BQG1 590 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 PIMREGQ9BSJ6 248 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 CHST5Q9GZS9 411 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 DNTTIP1Q9H147 329 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 FN3KRPQ9HA64 309 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 PLEKHA1Q9HB21 404 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 VCX3AQ9NNX9 186 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 GPR84Q9NQS5 396 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 ACOXLQ9NUZ1 547 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 PTTG3PQ9NZH4 202 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 MYRFQ9Y2G1 1151 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF281Q9Y2X9 895 aa7.2□□□□□ -1.26
PDGFC-205ENST00000506880 FLNAP21333 2647 aaKnown RBP7.2□□□□□ -1.26
PDGFC-205ENST00000506880 YLPM1P49750 1951 aaKnown RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 MED13LQ71F56 2210 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ABCA1O95477 2261 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 TRBV2A0A0J9YWF9 115 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 LRP5LA4QPB2 252 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 MEGF11A6BM72 1044 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 TRIM64BA6NI03 449 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 CLDN25C9JDP6 229 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 H3BUI4 141 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 J3QLW9 94 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 TMEM127O75204 238 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 INMTO95050 263 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 CLPTM1O96005 669 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 PNPP00491 289 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 IGHV1-46P01743 117 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 IRF2P14316 349 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 DAOP14920 347 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF19P17023 458 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 PCMT1P22061 227 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 BMXP51813 675 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ART1P52961 327 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 OR12D2P58182 307 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 LOXL1Q08397 574 aaPredicted RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 MLLT11Q13015 90 aaPredicted RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 RIN1Q13671 783 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 SPHARQ15513 63 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 SMN1Q16637 294 aaKnown RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 MSMPQ1L6U9 139 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 TMEM155Q4W5P6 130 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 DMKNQ6E0U4 476 aaPredicted RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 OR2T2Q6IF00 324 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 LAIR2Q6ISS4 152 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 AHSA2Q719I0 299 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 SSX6Q7RTT6 188 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF367Q7RTV3 350 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 LHFPL3Q86UP9 236 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 LSRQ86X29 649 aaPredicted RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 TGIF2LYQ8IUE0 185 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 SERPINA12Q8IW75 414 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ZDHHC23Q8IYP9 409 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 TEX29Q8N6K0 151 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF676Q8N7Q3 588 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 OR14K1Q8NGZ2 314 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 OR8S1Q8NH09 359 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF671Q8TAW3 534 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 OR51E1Q8TCB6 317 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 RAB1CQ92928 201 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 CNBD2Q96M20 576 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 SORCS2Q96PQ0 1159 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 NR1H4Q96RI1 486 aaPredicted RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 VRK1Q99986 396 aaPredicted RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ADAT1Q9BUB4 502 aaKnown RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 AMBNQ9NP70 447 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 PCDHB16Q9NRJ7 776 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF275Q9NSD4 429 aaPredicted RBP7.19□□□□□ -1.26
PDGFC-205ENST00000506880 RASL12Q9NYN1 266 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 FRRS1LQ9P0K9 344 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 SLC7A11Q9UPY5 501 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 PPP1R3CQ9UQK1 317 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 POLDIP2Q9Y2S7 368 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 NPTNQ9Y639 398 aa7.19□□□□□ -1.26
PDGFC-205ENST00000506880 OTOGQ6ZRI0 2925 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms