RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 DOCK6Q96HP0 2047 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 WDR87Q6ZQQ6 2873 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CHD7Q9P2D1 2997 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SCN8AQ9UQD0 1980 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 COL4A2P08572 1712 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 LAMA3Q16787 3333 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 UNC80Q8N2C7 3258 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 IGKV3D-11A0A0A0MRZ8 115 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 A0A1W2PQD3 144 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 TRAPPC13A5PLN9 417 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 EFCAB10A6NFE3 127 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OR6C70A6NIJ9 312 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 VSTM2BA6NLU5 285 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 EFCAB7A8K855 629 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 IDSB3KWA1 339 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 C4orf51C9J302 202 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 D6RAR5 112 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 H3BMH7 237 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 H3BN98 237 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF701M0R085 212 aaPredicted RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 TP53I11O14683 189 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 BCKDKO14874 412 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF264O43296 627 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CHP2O43745 196 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OR10H3O60404 316 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 EIF4E2O60573 245 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 TSC22D2O75157 780 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ALOX12BO75342 701 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 KCNK2O95069 426 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 SNAP29O95721 258 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CSTAP01040 98 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 IGF2P01344 180 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OPN1SWP03999 348 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 IGKV3-11P04433 115 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 HMGN1P05114 100 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 UBTFL6P0CB48 400 aaPredicted RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ATP6V1B1P15313 513 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 AREGP15514 252 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 KLK2P20151 261 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 TBXA2RP21731 343 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 RPS4Y1P22090 263 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 PAICSP22234 425 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CRHBPP24387 322 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 UCP1P25874 307 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CD82P27701 267 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 IL12BP29460 328 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 GGT2P36268 569 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 MAP3K8P41279 467 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OR1D4P47884 311 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OR1E2P47887 323 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 EMDP50402 254 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CNN1P51911 297 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CRISP1P54107 249 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 EMP2P54851 167 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CASP9P55211 416 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC26A5P58743 744 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 GABARAPL2P60520 117 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 PRPS1P60891 318 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 PPP1CAP62136 330 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 SNRPGP62308 76 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 RPS4XP62701 263 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 RPS15P62841 145 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 BTG2P78543 158 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ADARB1P78563 741 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 IL5RAQ01344 420 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 IL1RL1Q01638 556 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF85Q03923 595 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 TSPAN31Q12999 210 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 SRSF5Q13243 272 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 TMED1Q13445 227 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 C1DQ13901 141 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 C16orf72Q14CZ0 275 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 PTGES3Q15185 160 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 TGIF1Q15583 401 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 LTB4RQ15722 352 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 Q1RN00 199 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 EXOC3L2Q2M3D2 409 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 DEFB110Q30KQ9 67 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKRD55Q3KP44 614 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ACER2Q5QJU3 275 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF691Q5VV52 312 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 FAM219BQ5XKK7 198 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 RTL6Q6ICC9 239 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 C1orf94Q6P1W5 598 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF773Q6PK81 442 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 C5orf46Q6UWT4 87 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 BAIAP2L2Q6UXY1 529 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 RTL4Q6ZR62 310 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 MBOAT2Q6ZWT7 520 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 PRSS41Q7RTY9 318 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 NAXDQ8IW45 347 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 CLDN22Q8N7P3 220 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF615Q8N8J6 731 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 B3GNT7Q8NFL0 401 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 BEST4Q8NFU0 473 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 GPR32P1Q8NGA4 272 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OR4K5Q8NGD3 323 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OR8J1Q8NGP2 316 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 OR52J3Q8NH60 311 aa1.93□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF420Q8TAQ5 688 aaPredicted RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms