RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FGGYQ96C11 551 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ARV1Q9H2C2 271 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF385DQ9H6B1 395 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 CES1P1Q9UKY3 287 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 COPS3Q9UNS2 423 aa4.29□□□□□ -1.72
NIPBL-204ENST00000504430 ZBED9Q6R2W3 1325 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 A0A0G2JLM5 398 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 CCDC160A6NGH7 325 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 MFSD11O43934 449 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 SLC2A10O95528 541 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 HOXB7P09629 217 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 OGNP20774 298 aaKnown RBP4.28□□□□□ -1.72
NIPBL-204ENST00000504430 RARRES1P49788 294 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 BCL2L1Q07817 233 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 HENMT1Q5T8I9 393 aaKnown RBP4.28□□□□□ -1.72
NIPBL-204ENST00000504430 OR10K2Q6IF99 312 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 IGFL2Q6UWQ7 119 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 PTAR1Q7Z6K3 402 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-204ENST00000504430 SLC30A8Q8IWU4 369 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 RDH10Q8IZV5 341 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 C15orf54Q8N8G6 183 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 ZNF557Q8N988 423 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-204ENST00000504430 RFESDQ8TAC1 157 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 C11orf40Q8WZ69 217 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 DDB2Q92466 427 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 VPS29Q9UBQ0 182 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 BTNL2Q9UIR0 455 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 MRPS18CQ9Y3D5 142 aaKnown RBP4.28□□□□□ -1.72
NIPBL-204ENST00000504430 NCANO14594 1321 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 SMIM35A0A1B0GVV1 85 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
NIPBL-204ENST00000504430 PIAS1O75925 651 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 SLC22A5O76082 557 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 HAND1O96004 215 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 SERPINA7P05543 415 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 CD1DP15813 335 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 CCR7P32248 378 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 RORCP51449 518 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 SSR4P51571 173 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 PROK1P58294 105 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 TWF1Q12792 350 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 CEACAM21Q3KPI0 293 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 CYBRD1Q53TN4 286 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 HIST2H3PS2Q5TEC6 136 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 C1orf189Q5VU69 101 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 NIT1Q86X76 327 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 AGAP11Q8TF27 550 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 VPS25Q9BRG1 176 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 OR11A1Q9GZK7 315 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 NT5DC2Q9H857 520 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 WDR41Q9HAD4 459 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 RPL36Q9Y3U8 105 aaKnown RBP4.28□□□□□ -1.72
NIPBL-204ENST00000504430 C9orf84Q5VXU9 1444 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 CCNB3Q8WWL7 1395 aa4.28□□□□□ -1.72
NIPBL-204ENST00000504430 DOCK7Q96N67 2140 aa4.28□□□□□ -1.73
NIPBL-204ENST00000504430 UQCRHLA0A096LP55 91 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 OTOL1A6NHN0 477 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF705EA8MWA4 302 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SLC25A27O95847 323 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 UQCRHP07919 91 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 GIPP09681 153 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 FRMD6-AS1P0C7T7 363 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 MED14OSP0DP75 135 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 CYBAP13498 195 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 DEFA3P59666 94 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 C3orf62Q6ZUJ4 267 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SLC36A1Q7Z2H8 476 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 ZBTB8OSQ8IWT0 167 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 LRRC25Q8N386 305 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF442Q9H7R0 627 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SIAEQ9HAT2 523 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 AURKAIP1Q9NWT8 199 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 FBXO7Q9Y3I1 522 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 EXOC1LA0A1B0GW35 172 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 POP7O75817 140 aaKnown RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF708P17019 499 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 CALML3P27482 149 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 HTR1DP28221 377 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SULT1A1P50225 295 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SULT1A2P50226 295 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 ABCE1P61221 599 aaKnown RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 POU3F1Q03052 451 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SPICQ8N5J4 248 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 STOML3Q8TAV4 291 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 FAM45AQ8TCE6 357 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 RDH5Q92781 318 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 HAUS1Q96CS2 278 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 TM2D1Q9BX74 207 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF224Q9NZL3 707 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 TMEM131Q92545 1883 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 BICRAQ9NZM4 1560 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 ADAMTSL3P82987 1691 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SMIM24O75264 130 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 DCTN3O75935 186 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 IFNA1P01562 189 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 TPI1P60174 286 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 DEFA6Q01524 100 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 CDK10Q15131 360 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms