RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 SERPINE3A8MV23 424 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 ZNF705EA8MWA4 302 aaPredicted RBP13.22□□□□□ -0.29
SNF8-203ENST00000504000 MBTPS2O43462 519 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 EFNA2O43921 213 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 RAD51DO75771 328 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 AMY2BP19961 511 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 LTBRP36941 435 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 OR3A4PP47883 348 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 OR3A2P47893 321 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 ZNF41P51814 821 aaPredicted RBP13.22□□□□□ -0.29
SNF8-203ENST00000504000 OR1D5P58170 312 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 ZNF121P58317 390 aaPredicted RBP13.22□□□□□ -0.29
SNF8-203ENST00000504000 PLPPR5Q32ZL2 321 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 ANKRD55Q3KP44 614 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 Q6ZSR3 168 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 SLC16A14Q7RTX9 510 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 BOLLQ8N9W6 283 aaKnown RBP13.22□□□□□ -0.29
SNF8-203ENST00000504000 PNLDC1Q8NA58 520 aaKnown RBP13.22□□□□□ -0.29
SNF8-203ENST00000504000 SMRP1Q8NCR6 262 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 CCDC54Q8NEL0 328 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 OR14K1Q8NGZ2 314 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 OR13G1Q8NGZ3 307 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 ARHGAP5-AS1Q96IT6 56 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 NRIP2Q9BQI9 281 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 SAV1Q9H4B6 383 aaPredicted RBP13.22□□□□□ -0.29
SNF8-203ENST00000504000 BIN3Q9NQY0 253 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 OR5AC2Q9NZP5 309 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 VDAC3Q9Y277 283 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 EXPH5Q8NEV8 1989 aa13.22□□□□□ -0.29
SNF8-203ENST00000504000 MSGN1A6NI15 193 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 KCNAB3O43448 404 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 TRAF3IP2O43734 574 aaPredicted RBP13.21□□□□□ -0.29
SNF8-203ENST00000504000 ZNF354AO60765 605 aaPredicted RBP13.21□□□□□ -0.29
SNF8-203ENST00000504000 ADAP1O75689 374 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 GAPDHP04406 335 aaKnown RBP13.21□□□□□ -0.29
SNF8-203ENST00000504000 NR2C1P13056 603 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
SNF8-203ENST00000504000 AKR1C2P52895 323 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 NXPH1P58417 271 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 AKR1C1Q04828 323 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 C1orf189Q5VU69 101 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 RHBDD2Q6NTF9 364 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 TMPPEQ6ZT21 453 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 ANKRD37Q7Z713 158 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 STT3BQ8TCJ2 826 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 NECAB3Q96P71 396 aaPredicted RBP13.21□□□□□ -0.29
SNF8-203ENST00000504000 TM2D1Q9BX74 207 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 METTL8Q9H825 291 aaKnown RBP13.21□□□□□ -0.29
SNF8-203ENST00000504000 RHOFQ9HBH0 211 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 POLR1DQ9Y2S0 133 aa13.21□□□□□ -0.29
SNF8-203ENST00000504000 ZNF98A6NK75 572 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 RRP8O43159 456 aaKnown RBP13.21□□□□□ -0.3
SNF8-203ENST00000504000 CRTAPO75718 401 aaPredicted RBP13.21□□□□□ -0.3
SNF8-203ENST00000504000 CD5P06127 495 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 HCKP08631 526 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 SULT1A2P50226 295 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 SRSF3P84103 164 aaKnown RBP13.21□□□□□ -0.3
SNF8-203ENST00000504000 RAB32Q13637 225 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 ARFRP1Q13795 201 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 TMEM88Q6PEY1 159 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 WDR74Q6RFH5 385 aaPredicted RBP13.21□□□□□ -0.3
SNF8-203ENST00000504000 RTN4RL2Q86UN3 420 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 OR5L2Q8NGL0 311 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 RLN3Q8WXF3 142 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 ZNF775Q96BV0 537 aaPredicted RBP13.21□□□□□ -0.3
SNF8-203ENST00000504000 C10orf35Q96D05 121 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 OXGR1Q96P68 337 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 OR5B2Q96R09 309 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 TREM1Q9NP99 234 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 SLC22A11Q9NSA0 550 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 FGF21Q9NSA1 209 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 DECR2Q9NUI1 292 aa13.21□□□□□ -0.3
SNF8-203ENST00000504000 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 C2orf72A6NCS6 295 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 H3BML4 177 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 CST4P01036 141 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 GLB1P16278 677 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 LSM6P62312 80 aaKnown RBP13.2□□□□□ -0.3
SNF8-203ENST00000504000 SLC9A3R2Q15599 337 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 GFOD2Q3B7J2 385 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 RNF144BQ7Z419 303 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 RABEPKQ7Z6M1 372 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 LYPD6BQ8NI32 183 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 POC1BQ8TC44 478 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 SLC25A43Q8WUT9 341 aaPredicted RBP13.2□□□□□ -0.3
SNF8-203ENST00000504000 MICU1Q9BPX6 476 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 ZNF768Q9H5H4 540 aaKnown RBP13.2□□□□□ -0.3
SNF8-203ENST00000504000 SEC61A2Q9H9S3 476 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 C1orf123Q9NWV4 160 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 PPP4R1LQ9P1A2 415 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 ZNF319Q9P2F9 582 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 ASH2LQ9UBL3 628 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 ADAMTS9Q9P2N4 1935 aa13.2□□□□□ -0.3
SNF8-203ENST00000504000 XIRP2A4UGR9 3374 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms