RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SMURF1Q9HCE7 757 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 AASSQ9UDR5 926 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 MALT1Q9UDY8 824 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 WARS2Q9UGM6 360 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 FBXO9Q9UK97 447 aaPredicted RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.32□□□□□ -1.72
FXN-205ENST00000498653 RPL36Q9Y3U8 105 aaKnown RBP4.32□□□□□ -1.72
FXN-205ENST00000498653 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
FXN-205ENST00000498653 IGKV1D-43A0A0B4J1Z2 117 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 A0A1B0GW55 424 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 IRGMA1A4Y4 181 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 CCDC182A6NF36 153 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 EFCAB10A6NFE3 127 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 TVP23AA6NH52 213 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 ZNF99A8MXY4 864 aaPredicted RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 DCTN6O00399 190 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 SLC25A17O43808 307 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 WBP4O75554 376 aaKnown RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 DEDDO75618 318 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 FARS2O95363 451 aaKnown RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 AMY2AP04746 511 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DUX4L2P0CJ85 424 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DUX4L3P0CJ86 424 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DUX4L5P0CJ88 424 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DUX4L6P0CJ89 424 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DUX4L7P0CJ90 424 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 CLUP10909 449 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 ZNF823P16415 610 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 AMY2BP19961 511 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 NPR2P20594 1047 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 MSR1P21757 451 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 SLC2A5P22732 501 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 IGHV1-2P23083 117 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 CHATP28329 748 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 HTR1FP30939 366 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 CDAP32320 146 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 ATP6V1E1P36543 226 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 MTNR1AP48039 350 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 FOXG1P55316 489 aaPredicted RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 MRPS34P82930 218 aaKnown RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 TGFBR3Q03167 851 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 HSF2Q03933 536 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 GLO1Q04760 184 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 SMN1Q16637 294 aaKnown RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 TM4SF20Q53R12 229 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 RBM48Q5RL73 367 aaKnown RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 C6orf141Q5SZD1 244 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 C9orf135Q5VTT2 229 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 ANKRD16Q6P6B7 361 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DUX4L9Q6RFH8 374 aaPredicted RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 ZNF813Q6ZN06 617 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 Q6ZTK2 550 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 FOXL2NBQ6ZUU3 175 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 LINGO2Q7L985 606 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 SHFQ7M4L6 423 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 GABRG1Q8N1C3 465 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DEFB108BQ8NET1 73 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 BPIFB6Q8NFQ5 453 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 OR51L1Q8NGJ5 315 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 OR1K1Q8NGR3 316 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 APH1BQ8WW43 257 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 C11orf40Q8WZ69 217 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 RNFT2Q96EX2 444 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 INTS14Q96SY0 518 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 FOXB1Q99853 325 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 HDHD5Q9BXW7 423 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 YTHDF1Q9BYJ9 559 aaKnown RBP4.31□□□□□ -1.72
FXN-205ENST00000498653 KCNN2Q9H2S1 579 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 SIAEQ9HAT2 523 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 POLE4Q9NR33 117 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 PLCXD1Q9NUJ7 323 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 TMEM38BQ9NVV0 291 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 SCN3BQ9NY72 215 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 DUX4Q9UBX2 424 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 LRCH1Q9Y2L9 728 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 POLR1DQ9Y2S0 133 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 UGT2A1Q9Y4X1 527 aa4.31□□□□□ -1.72
FXN-205ENST00000498653 HEATR1Q9H583 2144 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 C12orf71A8MTZ7 269 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 SLC1A7O00341 560 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 ZNF593O00488 134 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 SELENOFO60613 162 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 LYZL6O75951 148 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 FADS2O95864 444 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 ITGA5P08648 1049 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 MRPL3P09001 348 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 CST2P09228 141 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 SPARCP09486 303 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 OR8G3PP0DMU2 310 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 DBTP11182 482 aaKnown RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 B4GALT1P15291 398 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 COX5AP20674 150 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 GATA3P23771 443 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 IL32P24001 234 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 APOBEC3AP31941 199 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 NAA10P41227 235 aaPredicted RBP4.3□□□□□ -1.72
FXN-205ENST00000498653 ENTPD1P49961 510 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 PPOXP50336 477 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 CXCR4P61073 352 aa4.3□□□□□ -1.72
FXN-205ENST00000498653 UBE2NP61088 152 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms