RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 Q96MT0 163 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 HIST1H2AAQ96QV6 131 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 MICU1Q9BPX6 476 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 GPR84Q9NQS5 396 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 FAM118AQ9NWS6 357 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 C1orf123Q9NWV4 160 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 MIOXQ9UGB7 285 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 NUFIP1Q9UHK0 495 aaKnown RBP10.75□□□□□ -0.69
HSPG2-213ENST00000498495 MRM2Q9UI43 246 aaKnown RBP10.75□□□□□ -0.69
HSPG2-213ENST00000498495 OR52A1Q9UKL2 312 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 SNX5Q9Y5X3 404 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 R4GMQ9 66 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
HSPG2-213ENST00000498495 hCG_1807616A0A1W2PRN6 198 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 METTL15A6NJ78 407 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 MTRF1O75570 445 aaKnown RBP10.74□□□□□ -0.69
HSPG2-213ENST00000498495 SULT1C4O75897 302 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 CST4P01036 141 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 WNT2P09544 360 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 ATP6V1B1P15313 513 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 CPT2P23786 658 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 ACKR3P25106 362 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 SRP14P37108 136 aaKnown RBP10.74□□□□□ -0.69
HSPG2-213ENST00000498495 LCN2P80188 198 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 MFGE8Q08431 387 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-213ENST00000498495 RIPPLY1Q0D2K3 151 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 PRDX4Q13162 271 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 LRRC36Q1X8D7 754 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 BCL2L15Q5TBC7 163 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 PLEKHG7Q6ZR37 379 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 ZNF826PQ6ZT77 177 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 SSX6Q7RTT6 188 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 ELMOD2Q8IZ81 293 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 DEFB108BQ8NET1 73 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 SEMA6DQ8NFY4 1073 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 OR1M1Q8NGA1 313 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 OR51E1Q8TCB6 317 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 RNF170Q96K19 258 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 FAM71F1Q96KD3 344 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-213ENST00000498495 TMEM246Q9BRR3 403 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 PPP1R3EQ9H7J1 279 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 MOB1AQ9H8S9 216 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 ABCB9Q9NP78 766 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 SMPD3Q9NY59 655 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-213ENST00000498495 AASSQ9UDR5 926 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 PCDHGB1Q9Y5G3 927 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 ZANQ9Y493 2812 aa10.74□□□□□ -0.69
HSPG2-213ENST00000498495 A0A0G2JMP0 313 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 A0A0X1KG70 313 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 ZNF816-ZNF321PA0A0X1KG74 233 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 DAPL1A0PJW8 107 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 CEACAM18A8MTB9 384 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 SLC16A6O15403 523 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 SRSF10O75494 262 aaKnown RBP10.73□□□□□ -0.69
HSPG2-213ENST00000498495 TTRP02766 147 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 RPS2P15880 293 aaKnown RBP10.73□□□□□ -0.69
HSPG2-213ENST00000498495 GABPB1Q06547 395 aaPredicted RBP10.73□□□□□ -0.69
HSPG2-213ENST00000498495 RCN1Q15293 331 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 KCNJ8Q15842 424 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 ZNF404Q494X3 552 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 ESCO2Q56NI9 601 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 DCAF12L2Q5VW00 463 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 LIPNQ5VXI9 398 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 SFRP4Q6FHJ7 346 aaPredicted RBP10.73□□□□□ -0.69
HSPG2-213ENST00000498495 KCTD8Q6ZWB6 473 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 ZDHHC23Q8IYP9 409 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 ENTHD1Q8IYW4 607 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 C19orf18Q8NEA5 215 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 OR4M2Q8NGB6 313 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 RHOXF1Q8NHV9 184 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 ITPKCQ96DU7 683 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 RDH12Q96NR8 316 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 RTL8AQ9BWD3 113 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 G6PC2Q9NQR9 355 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 C8orf4Q9NR00 106 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 SETD2Q9BYW2 2564 aaPredicted RBP10.73□□□□□ -0.69
HSPG2-213ENST00000498495 TLN2Q9Y4G6 2542 aa10.73□□□□□ -0.69
HSPG2-213ENST00000498495 TRAV38-1A0A0B4J264 116 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 F5H0A9 414 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-213ENST00000498495 LGALS8O00214 317 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 CDIPTO14735 213 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 IGLV3-1P01715 115 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 GABRB1P18505 474 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 GATA3P23771 443 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 ZFP36P26651 326 aaKnown RBP10.72□□□□□ -0.69
HSPG2-213ENST00000498495 SEC61A1P61619 476 aaKnown RBP10.72□□□□□ -0.69
HSPG2-213ENST00000498495 ACTC1P68032 377 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 ACTA1P68133 377 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 ZNF85Q03923 595 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 LPCAT4Q643R3 524 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 DCDC5Q6ZRR9 648 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 MOB3CQ70IA8 216 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 NLRC3Q7RTR2 1065 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 FAM220AQ7Z4H9 259 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 KCTD20Q7Z5Y7 419 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 WDR86Q86TI4 376 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 C11orf53Q8IXP5 236 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 TEX29Q8N6K0 151 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 OR5P3Q8WZ94 311 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 NEIL1Q96FI4 390 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms