RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KRTAP10-9P60411 292 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 PRDX4Q13162 271 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 OR8G1Q15617 311 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 MOGQ16653 247 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 SYT6Q5T7P8 510 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-227ENST00000498056 PLCXD3Q63HM9 321 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 C11orf71Q6IPW1 123 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 PAMR1Q6UXH9 720 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 NPRL2Q8WTW4 380 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 PIGCQ92535 297 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 ELMOD3Q96FG2 381 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 VRK1Q99986 396 aaPredicted RBP11.58□□□□□ -0.56
CPNE1-227ENST00000498056 GPR173Q9NS66 373 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 CYSLTR2Q9NS75 346 aa11.58□□□□□ -0.56
CPNE1-227ENST00000498056 MRPL15Q9P015 296 aaKnown RBP11.58□□□□□ -0.56
CPNE1-227ENST00000498056 NBPF19A0A087WUL8 3843 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 ANKRD61A6NGH8 418 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 ZNF850A8MQ14 1090 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 TPD52L2O43399 206 aaKnown RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 CD1AP06126 327 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 OCMP0CE72 109 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 BMP4P12644 408 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 PSMA1P25786 263 aaKnown RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 MAPK3P27361 379 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 PPOXP50336 477 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 INSL4Q14641 139 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 TRAM1Q15629 374 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 SWI5Q1ZZU3 235 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 MST1LQ2TV78 715 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 Q499Y3 187 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 CEP78Q5JTW2 689 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 Q6ZR03 302 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 ZDHHC23Q8IYP9 409 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 OR8S1Q8NH09 359 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 UBASH3BQ8TF42 649 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 TMEM106AQ96A25 262 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 FGGYQ96C11 551 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 ADAT3Q96EY9 351 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 CHST5Q9GZS9 411 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 LIME1Q9H400 295 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 EXOSC4Q9NPD3 245 aaKnown RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 ZNF275Q9NSD4 429 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 TMEM100Q9NV29 134 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 TAS2R4Q9NYW5 299 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 NOP16Q9Y3C1 178 aaKnown RBP11.57□□□□□ -0.56
CPNE1-227ENST00000498056 RHBDD3Q9Y3P4 386 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 FBN2P35556 2912 aa11.57□□□□□ -0.56
CPNE1-227ENST00000498056 USF3Q68DE3 2245 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 ABCA12Q86UK0 2595 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 CENPEQ02224 2701 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-227ENST00000498056 TRBV5-5A0A0J9YX44 114 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 ANXA2P2A6NMY6 339 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 C17orf100A8MU93 164 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 ZNF879B4DU55 563 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 H0YL77 283 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 GABRPO00591 440 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 MLNRO43193 412 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 GATBO75879 557 aaKnown RBP11.56□□□□□ -0.56
CPNE1-227ENST00000498056 SERPINA3P01011 423 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 CD8AP01732 235 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 IGHV1-46P01743 117 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 CD36P16671 472 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 JUNBP17275 347 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-227ENST00000498056 CD53P19397 219 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 TGFBR2P37173 567 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 RPS11P62280 158 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPNE1-227ENST00000498056 GPR50Q13585 617 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 DMRTC1Q5HYR2 192 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 CLVS2Q5SYC1 327 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 ZBTB37Q5TC79 503 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 Q6ZSR3 168 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 MOB3CQ70IA8 216 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 ZCCHC24Q8N2G6 241 aaKnown RBP11.56□□□□□ -0.56
CPNE1-227ENST00000498056 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 OR13C9Q8NGT0 318 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 OR13G1Q8NGZ3 307 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 TRMT10AQ8TBZ6 339 aaKnown RBP11.56□□□□□ -0.56
CPNE1-227ENST00000498056 THRSPQ92748 146 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 ORAI1Q96D31 301 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 DERL3Q96Q80 235 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 SLC30A2Q9BRI3 323 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 CXorf56Q9H5V9 222 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 PPP1R3EQ9H7J1 279 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 PLEKHA6Q9Y2H5 1048 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 PMF1-BGLAPU3KQ54 211 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 CELSR2Q9HCU4 2923 aa11.56□□□□□ -0.56
CPNE1-227ENST00000498056 IGHV3-64DA0A0J9YX35 117 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 A0A1W2PPK0 400 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 F5H5P2 479 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 CST4P01036 141 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 NRASP01111 189 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 RAF1P04049 648 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 ERCC1P07992 297 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-227ENST00000498056 TNFSF4P23510 183 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 GADD45AP24522 165 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 PPP3R1P63098 170 aa11.55□□□□□ -0.56
CPNE1-227ENST00000498056 TNFAIP6P98066 277 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-227ENST00000498056 FABP5Q01469 135 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms