RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 IGHV4-61A0A0C4DH41 118 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 LOC100289279A0A1B0GTE1 492 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 EFCAB10A6NFE3 127 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 A6NIN4 97 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 FAHP16930 419 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 PMELP40967 661 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 CD200P41217 278 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 GPR6P46095 362 aaPredicted RBP16.42■□□□□ 0.22
HDAC4-212ENST00000495497 MAP2K3P46734 347 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 PRDX4Q13162 271 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 DMRTC1Q5HYR2 192 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 OR2G6Q5TZ20 316 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 MOGAT3Q86VF5 341 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 ZNF540Q8NDQ6 660 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 SEMA6DQ8NFY4 1073 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 CNBD2Q96M20 576 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 NARFLQ9H6Q4 476 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 GCM1Q9NP62 436 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 UFSP2Q9NUQ7 469 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 CNOT2Q9NZN8 540 aaKnown RBP16.42■□□□□ 0.22
HDAC4-212ENST00000495497 RAB26Q9ULW5 256 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 PPP1R3CQ9UQK1 317 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 EXOSC1Q9Y3B2 195 aaKnown RBP16.42■□□□□ 0.22
HDAC4-212ENST00000495497 HIVEP1P15822 2718 aa16.42■□□□□ 0.22
HDAC4-212ENST00000495497 SLC1A7O00341 560 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 WNT9BO14905 357 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 LMX1BO60663 402 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 DHRS3O75911 302 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 INHBBP09529 407 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 PIPP12273 146 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-212ENST00000495497 C21orf33P30042 268 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-212ENST00000495497 GNALP38405 381 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 GTF2A1P52655 376 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-212ENST00000495497 TMEM33P57088 247 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 RIPPLY1Q0D2K3 151 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 MPPED2Q15777 294 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 STX19Q8N4C7 294 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 PLPP7Q8NBV4 271 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 OR14K1Q8NGZ2 314 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 SGCDQ92629 289 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 GSX1Q9H4S2 264 aaPredicted RBP16.41■□□□□ 0.22
HDAC4-212ENST00000495497 TMEM106BQ9NUM4 274 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 FKBP14Q9NWM8 211 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 V9GYS6 101 aa16.41■□□□□ 0.22
HDAC4-212ENST00000495497 ZNF816-ZNF321PA0A0X1KG74 233 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 A0A1B0GVI7 797 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 LRP5LA4QPB2 252 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 PTGES3LE9PB15 166 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 SYT7O43581 403 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 CST4P01036 141 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 GRPP07492 148 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 MYL12AP19105 171 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 CCL1P22362 96 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 USF1P22415 310 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-212ENST00000495497 ALKBH1Q13686 389 aaKnown RBP16.4■□□□□ 0.22
HDAC4-212ENST00000495497 FDX2Q6P4F2 183 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 DOK3Q7L591 496 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 WDR86Q86TI4 376 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 KLHL36Q8N4N3 616 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 OR8S1Q8NH09 359 aa16.4■□□□□ 0.22
HDAC4-212ENST00000495497 MYCBPQ99417 103 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-212ENST00000495497 ZNF184Q99676 751 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-212ENST00000495497 FGF23Q9GZV9 251 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-212ENST00000495497 CAB39Q9Y376 341 aaPredicted RBP16.4■□□□□ 0.22
HDAC4-212ENST00000495497 NOP16Q9Y3C1 178 aaKnown RBP16.4■□□□□ 0.22
HDAC4-212ENST00000495497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 LOC107986453A0A1B0GWG9 222 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 CLDN25C9JDP6 229 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 MTRF1O75570 445 aaKnown RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 CYB5R3P00387 301 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 ATP6V1B1P15313 513 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 GBX2P52951 348 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 HOXA4Q00056 320 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 LOXL1Q08397 574 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 CEP78Q5JTW2 689 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 XAF1Q6GPH4 301 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 MOB3CQ70IA8 216 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 KLBQ86Z14 1044 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 SPERTQ8NA61 448 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 HPSE2Q8WWQ2 592 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 GATAD2BQ8WXI9 593 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 ITPKCQ96DU7 683 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 PAK1IP1Q9NWT1 392 aaPredicted RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 CHCHD3Q9NX63 227 aaKnown RBP16.39■□□□□ 0.21
HDAC4-212ENST00000495497 ENPP5Q9UJA9 477 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 WIPI2Q9Y4P8 454 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 MPC1Q9Y5U8 109 aa16.39■□□□□ 0.21
HDAC4-212ENST00000495497 OR4C45A6NMZ5 311 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 ZNF205O95201 554 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 LALBAP00709 142 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 UBCP0CG48 685 aaKnown RBP16.38■□□□□ 0.21
HDAC4-212ENST00000495497 FOSL1P15407 271 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 IL2RGP31785 369 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 THBS2P35442 1172 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 GATA4P43694 442 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 CCR9P51686 369 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 SNCBQ16143 134 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 TMPRSS11AQ6ZMR5 421 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 Q6ZSR3 168 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 ZNF826PQ6ZT77 177 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms