RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 C11orf87Q6NUJ2 197 aa7.12□□□□□ -1.27
BRCA1-221ENST00000493795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.12□□□□□ -1.272e-8■■■■■ 27.8
BRCA1-221ENST00000493795 SYS1Q8N2H4 156 aa7.12□□□□□ -1.27
BRCA1-221ENST00000493795 LAT2Q9GZY6 243 aa7.12□□□□□ -1.27
BRCA1-221ENST00000493795 NAA60Q9H7X0 242 aa7.12□□□□□ -1.27
BRCA1-221ENST00000493795 THYN1Q9P016 225 aa7.12□□□□□ -1.27
BRCA1-221ENST00000493795 LHX3Q9UBR4 397 aa7.12□□□□□ -1.27
BRCA1-221ENST00000493795 TCFL5Q9UL49 500 aa7.12□□□□□ -1.27
BRCA1-221ENST00000493795 MAP1LC3B2A6NCE7 125 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 TMEM127O75204 238 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CST7O76096 145 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 TIMP1P01033 207 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 GAMTQ14353 236 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 GPNMBQ14956 572 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 MUC15Q8N387 334 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 IP6K3Q96PC2 410 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 ZNF426Q9BUY5 554 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 MAP1LC3BQ9GZQ8 125 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 AMMECR1Q9Y4X0 333 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 OR51B4Q9Y5P0 310 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 A0A096LPE4 126 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 A0A1W2PPZ6 126 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 ZC3H12DA2A288 527 aaKnown RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 H3BP45 60 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 NRG2O14511 850 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 LYZL6O75951 148 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CSN3P07498 182 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 ATF1P18846 271 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 SLC25A26Q70HW3 274 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 RBM45Q8IUH3 476 aaKnown RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 OR1N2Q8NGR9 330 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 EXTL1Q92935 676 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 RPEQ96AT9 228 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 WDR89Q96FK6 387 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CMC2Q9NRP2 79 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 HCFC1R1Q9NWW0 138 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 NUMBLQ9Y6R0 609 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 IFITM5A6NNB3 132 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CA3P07451 260 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CD99P14209 185 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 TNFRSF1AP19438 455 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 SDHBP21912 280 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CSNK1EP49674 416 aaKnown RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 DIO1P49895 249 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 ZNF252P-AS1Q0IIN9 211 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 HLA-BQ31612 363 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 ANKRD55Q3KP44 614 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 TMEM128Q5BJH2 165 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CLLU1Q5K131 121 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CGB2Q6NT52 195 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 PRSS42Q7Z5A4 293 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 PTRH1Q86Y79 214 aaKnown RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 ANAPC16Q96DE5 110 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 SCMH1Q96GD3 660 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 RAB40CQ96S21 281 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 IL17BQ9UHF5 180 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 POM121BA6NF01 834 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 LMX1BO60663 402 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 HIST1H1CP16403 213 aaKnown RBP7.11□□□□□ -1.27
BRCA1-221ENST00000493795 FPR2P25090 351 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 CD226Q15762 336 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 TTC32Q5I0X7 151 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 ABHD17CQ6PCB6 329 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 STAC2Q6ZMT1 411 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 FBXL14Q8N1E6 418 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 TTC9BQ8N6N2 239 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 OR1N1Q8NGS0 311 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 PRRX2Q99811 253 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 GPR87Q9BY21 358 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 SLC35B3Q9H1N7 401 aa7.11□□□□□ -1.27
BRCA1-221ENST00000493795 IQGAP1P46940 1657 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 SETD1AO15047 1707 aaKnown RBP7.1□□□□□ -1.27
BRCA1-221ENST00000493795 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 A6NJY4 79 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 SLC2A10O95528 541 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 GPANK1O95872 356 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 MGPP08493 103 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 EMP1P54849 157 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 CLDN15P56746 228 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 TCTN1Q2MV58 587 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 ZNF750Q32MQ0 723 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 ELFN2Q5R3F8 820 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 CST9Q5W186 159 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 TRAT1Q6PIZ9 186 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 TBC1D26Q86UD7 250 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 Q8IYB0 196 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 ARIH2OSQ8N7S6 290 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 BCORP1Q8N888 145 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 ANKLE1Q8NAG6 615 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 RAB24Q969Q5 203 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 A0A087X0M5 115 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 A0A1B0GX30 115 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 OR4C46A6NHA9 309 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 PGA3P0DJD8 388 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 CD82P27701 267 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 OR10J1P30954 320 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 THBS4P35443 961 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 FAM71E1Q6IPT2 247 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 C15orf39Q6ZRI6 1047 aa7.1□□□□□ -1.27
BRCA1-221ENST00000493795 PDPNQ86YL7 162 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms