RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 OR14K1Q8NGZ2 314 aa10.65□□□□□ -0.7
SNX17-208ENST00000493711 PPP1R14AQ96A00 147 aa10.65□□□□□ -0.7
SNX17-208ENST00000493711 MS4A5Q9H3V2 200 aa10.65□□□□□ -0.7
SNX17-208ENST00000493711 POFUT1Q9H488 388 aa10.65□□□□□ -0.7
SNX17-208ENST00000493711 ZNF275Q9NSD4 429 aaPredicted RBP10.65□□□□□ -0.7
SNX17-208ENST00000493711 MPC1Q9Y5U8 109 aa10.65□□□□□ -0.7
SNX17-208ENST00000493711 SPTBN1Q01082 2364 aaKnown RBP10.65□□□□□ -0.71
SNX17-208ENST00000493711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.64□□□□□ -0.71
SNX17-208ENST00000493711 TRBV5-5A0A0J9YX44 114 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 PNMA8CA0A1B0GUJ8 204 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 C5orf63A6NC05 138 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 ZNF879B4DU55 563 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 GMDSO60547 372 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 ARL6IP5O75915 188 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 RGS9O75916 674 aaPredicted RBP10.64□□□□□ -0.71
SNX17-208ENST00000493711 CST4P01036 141 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 TFAP2AP05549 437 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 ALDH3B2P48448 385 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 SNRPD2P62316 118 aaKnown RBP10.64□□□□□ -0.71
SNX17-208ENST00000493711 NKPD1Q17RQ9 610 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 CLVS2Q5SYC1 327 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 OR2T2Q6IF00 324 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 GPR141Q7Z602 305 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 TMEM200AQ86VY9 491 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 SERPINA12Q8IW75 414 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 RDH10Q8IZV5 341 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 OR56B2PQ8NGI1 322 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 OR13G1Q8NGZ3 307 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 HIST1H2AAQ96QV6 131 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 TMED9Q9BVK6 235 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 MRPL37Q9BZE1 423 aaKnown RBP10.64□□□□□ -0.71
SNX17-208ENST00000493711 CBLN4Q9NTU7 201 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 TMEM100Q9NV29 134 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 TAAR3PQ9P1P4 343 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 CKLFQ9UBR5 152 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 ZDHHC8Q9ULC8 765 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 PIGLQ9Y2B2 252 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 PMF1-BGLAPU3KQ54 211 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 CENPEQ02224 2701 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 CRYBG3Q68DQ2 2970 aa10.64□□□□□ -0.71
SNX17-208ENST00000493711 TRDV1A0A1B0GX56 115 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 M0R233 179 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 ALX3O95076 343 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 ERCC1P07992 297 aaPredicted RBP10.63□□□□□ -0.71
SNX17-208ENST00000493711 CD36P16671 472 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 TNFSF4P23510 183 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 SSX1Q16384 188 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 PCGF3Q3KNV8 242 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 ACSM3Q53FZ2 586 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 FAM209AQ5JX71 171 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 CD200R1LQ6Q8B3 271 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 UTS2BQ765I0 119 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 ZNF295-AS1Q8N0V1 137 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 LINC00528Q8N1L1 170 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 PARP16Q8N5Y8 322 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 OR13F1Q8NGS4 319 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 RGP1Q92546 391 aaPredicted RBP10.63□□□□□ -0.71
SNX17-208ENST00000493711 NEUROG1Q92886 237 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 TMEM106AQ96A25 262 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 SYT3Q9BQG1 590 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 SLC30A2Q9BRI3 323 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 UBTD1Q9HAC8 227 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 NKIRAS2Q9NYR9 191 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 STUB1Q9UNE7 303 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 SSR3Q9UNL2 185 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 GSTK1Q9Y2Q3 226 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 SF3B6Q9Y3B4 125 aaKnown RBP10.63□□□□□ -0.71
SNX17-208ENST00000493711 HCFC1P51610 2035 aa10.63□□□□□ -0.71
SNX17-208ENST00000493711 CSMD1Q96PZ7 3565 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 ICE1Q9Y2F5 2266 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 A0A1B0GWJ7 208 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 ANXA2P2A6NMY6 339 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 GPX5O75715 221 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 SC5DO75845 299 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 ADH4P08319 380 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 DANCRP0C864 163 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 ANOS1P23352 680 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 ACKR3P25106 362 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 COL8A1P27658 744 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 PPOXP50336 477 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 RPS11P62280 158 aaKnown RBP eCLIP10.62□□□□□ -0.71
SNX17-208ENST00000493711 PPP3R1P63098 170 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 DOC2BQ14184 412 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 CNN3Q15417 329 aaKnown RBP10.62□□□□□ -0.71
SNX17-208ENST00000493711 SWI5Q1ZZU3 235 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 TMEM42Q69YG0 159 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 UNQ9370/PRO34162Q6UXP9 181 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 CEACAM19Q7Z692 300 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 TMEM203Q969S6 136 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 FGGYQ96C11 551 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 YIPF6Q96EC8 236 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 CPNE2Q96FN4 548 aaPredicted RBP10.62□□□□□ -0.71
SNX17-208ENST00000493711 PAPOLGQ9BWT3 736 aaKnown RBP10.62□□□□□ -0.71
SNX17-208ENST00000493711 CHST5Q9GZS9 411 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 SLITRK2Q9H156 845 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 PLEKHF2Q9H8W4 249 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 DYNLRB1Q9NP97 96 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 C14orf119Q9NWQ9 140 aa10.62□□□□□ -0.71
SNX17-208ENST00000493711 FZR1Q9UM11 496 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms