RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 RBFOX1Q9NWB1 397 aaKnown RBP1.79□□□□□ -2.12
SMC4-223ENST00000493695 CAB39Q9Y376 341 aaPredicted RBP1.79□□□□□ -2.12
SMC4-223ENST00000493695 SCN4AP35499 1836 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 BRCA1P38398 1863 aaKnown RBP1.78□□□□□ -2.12
SMC4-223ENST00000493695 ADGRL1O94910 1474 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 WDR19Q8NEZ3 1342 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 CCL15-CCL14A0A0B4J2E2 113 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 A0A1B0GTQ1 180 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 LINC01619G3V211 115 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 PSPHP1O15172 72 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 CASC3O15234 703 aaKnown RBP1.78□□□□□ -2.12
SMC4-223ENST00000493695 SIVA1O15304 175 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 KRT16P08779 473 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 THRAP10827 490 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 NELFEP18615 380 aaKnown RBP1.78□□□□□ -2.12
SMC4-223ENST00000493695 GGT2P36268 569 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 MAGEA1P43355 309 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 OR1G1P47890 313 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 AP1S2P56377 157 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 ELF3P78545 371 aaPredicted RBP1.78□□□□□ -2.12
SMC4-223ENST00000493695 DNAJC3Q13217 504 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 GABRA6Q16445 453 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 CCL15Q16663 113 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 TMEM236Q5W0B7 351 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 KDM4DQ6B0I6 523 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 TMPRSS11AQ6ZMR5 421 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 C16orf47Q6ZP98 133 aaPredicted RBP1.78□□□□□ -2.12
SMC4-223ENST00000493695 UNC93AQ86WB7 457 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 DAW1Q8N136 415 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 UBE2E2Q96LR5 201 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 NUDT9Q9BW91 350 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 SFXN3Q9BWM7 321 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 FRMD8P1Q9BZ68 369 aaPredicted RBP1.78□□□□□ -2.12
SMC4-223ENST00000493695 LINC00574Q9H8X3 128 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 MCUBQ9NWR8 336 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 MRPL22Q9NWU5 206 aaKnown RBP1.78□□□□□ -2.12
SMC4-223ENST00000493695 HES2Q9Y543 173 aa1.78□□□□□ -2.12
SMC4-223ENST00000493695 MROH7Q68CQ1 1323 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 ZNF98A6NK75 572 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 SLC22A20A6NK97 555 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 VGLL3A8MV65 326 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 SUPT3HB4E1H0 165 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 AKR7A2O43488 359 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 GATBO75879 557 aaKnown RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 SCELO95171 688 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 TGM6O95932 706 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 TCP1P17987 556 aaKnown RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 CXCR1P25024 350 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 GPR1P46091 355 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 RAB7AP51149 207 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 CCNG1P51959 295 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 CMC4P56277 68 aaPredicted RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 RAB11AP62491 216 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 MAD2L1BPQ15013 274 aaPredicted RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 OR1Q1Q15612 314 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 RAB11BQ15907 218 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 HADHQ16836 314 aaKnown RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 MFSD14CQ5VZR4 134 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 PLCXD3Q63HM9 321 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 STEAP4Q687X5 459 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 OPN5Q6U736 354 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 OTUD6AQ7L8S5 288 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 MDP1Q86V88 176 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 RAB43Q86YS6 212 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 CMTM8Q8IZV2 173 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 INO80EQ8NBZ0 244 aaPredicted RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 DCAKDQ8WVC6 231 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 ASZ1Q8WWH4 475 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 PEX13Q92968 403 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 RERGQ96A58 199 aaPredicted RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 WDR34Q96EX3 536 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 CSPG4P5Q96PW8 444 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 NCOR1P1Q9H4R4 102 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 C8orf33Q9H7E9 229 aaPredicted RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 REEP1Q9H902 201 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 PXMP2Q9NR77 195 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 ZNF586Q9NXT0 402 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 PEF1Q9UBV8 284 aaKnown RBP1.77□□□□□ -2.13
SMC4-223ENST00000493695 SIGLEC7Q9Y286 467 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 MMACHCQ9Y4U1 282 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 LRRC42Q9Y546 428 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 FBN3Q75N90 2809 aa1.77□□□□□ -2.13
SMC4-223ENST00000493695 TICRRQ7Z2Z1 1910 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 PLEKHG2Q9H7P9 1386 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 JCADQ9P266 1359 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 NLRC5Q86WI3 1866 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 TTC41PQ6P2S7 1318 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 GOLGA6L7A0A1B0GV03 622 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.76□□□□□ -2.13
SMC4-223ENST00000493695 M0R1X1 148 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 CATP04040 527 aaKnown RBP1.76□□□□□ -2.13
SMC4-223ENST00000493695 STAG3L3P0CL85 134 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 COL8A2P25067 703 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 CD34P28906 385 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 CLDN6P56747 220 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 DAOAP59103 153 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 RPL18AQ02543 176 aaKnown RBP1.76□□□□□ -2.13
SMC4-223ENST00000493695 NAB1Q13506 487 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 FAM53BQ14153 422 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms