RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 OPRL1P41146 370 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 NAA10P41227 235 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-223ENST00000493618 ARF6P62330 175 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 TMEM236Q5W0B7 351 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 BTN2A1Q7KYR7 527 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 SHFQ7M4L6 423 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 PDZD9Q8IXQ8 264 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 BBS1Q8NFJ9 593 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 LHX4Q969G2 390 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 WDFY2Q96P53 400 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 CCL13Q99616 98 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
ATG4B-223ENST00000493618 SP140LQ9H930 580 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 TRIM36Q9NQ86 728 aa12.13□□□□□ -0.47
ATG4B-223ENST00000493618 CENPVL3A0A0U1RRI6 287 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 P2RY10O00398 339 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 CDIPTO14735 213 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 E2F6O75461 281 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 APOC1P02654 83 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 TFF1P04155 84 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 LYNP07948 512 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 MMP9P14780 707 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 GNALP38405 381 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 HCCSP53701 268 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 WDR38Q5JTN6 314 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 TEX36Q5VZQ5 186 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 SHISA2Q6UWI4 295 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 WDR82Q6UXN9 313 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 SPATA24Q86W54 205 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-223ENST00000493618 CPOQ8IVL8 374 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 FAM216BQ8N7L0 139 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 PNLDC1Q8NA58 520 aaKnown RBP12.12□□□□□ -0.47
ATG4B-223ENST00000493618 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
ATG4B-223ENST00000493618 ARRDC5A6NEK1 342 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 AQP12BA6NM10 295 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 ZNF850A8MQ14 1090 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 SRRM5B3KS81 715 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-223ENST00000493618 NDUFA2O43678 99 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 OSMP13725 252 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 ACKR3P25106 362 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 RPS7P62081 194 aaKnown RBP12.11□□□□□ -0.47
ATG4B-223ENST00000493618 IL13RA1P78552 427 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 PRB3Q04118 309 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-223ENST00000493618 PRDX4Q13162 271 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 GK3PQ14409 553 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 METTL11BQ5VVY1 283 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 C16orf87Q6PH81 154 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 Q6YL49 198 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 AQP12AQ8IXF9 295 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 OR5T2Q8NGG2 359 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 OR52H1Q8NGJ2 320 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 OTOSQ8NHW6 89 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 RPL3LQ92901 407 aaKnown RBP12.11□□□□□ -0.47
ATG4B-223ENST00000493618 TMIGD2Q96BF3 282 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 LYZL4Q96KX0 146 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 FGF23Q9GZV9 251 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-223ENST00000493618 C1orf21Q9H246 121 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 ZNF556Q9HAH1 456 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 SNTG1Q9NSN8 517 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 KIF17Q9P2E2 1029 aa12.11□□□□□ -0.47
ATG4B-223ENST00000493618 PKD1L1Q8TDX9 2849 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 FAM181BA6NEQ2 426 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 PSMD9O00233 223 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 WIPF1O43516 503 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 LIPFP07098 398 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 MELTFP08582 738 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 MRPL3P09001 348 aaKnown RBP12.1□□□□□ -0.47
ATG4B-223ENST00000493618 SELLP14151 372 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 CFL1P23528 166 aaKnown RBP12.1□□□□□ -0.47
ATG4B-223ENST00000493618 CBX1P83916 185 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 CDK5Q00535 292 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 IKZF1Q13422 519 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 MICBQ29980 383 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 FIP1L1Q6UN15 594 aaKnown RBP12.1□□□□□ -0.47
ATG4B-223ENST00000493618 KCTD8Q6ZWB6 473 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 CSNK2A3Q8NEV1 391 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 OR8B12Q8NGG6 310 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 GATAD2BQ8WXI9 593 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 PIGCQ92535 297 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 MICU1Q9BPX6 476 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 RTL8AQ9BWD3 113 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 TTTY10Q9BZA0 68 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 CHIAQ9BZP6 476 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 ONECUT1Q9UBC0 465 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 DNAJB11Q9UBS4 358 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 LRP12Q9Y561 859 aa12.1□□□□□ -0.47
ATG4B-223ENST00000493618 IGHV1-69DA0A0B4J2H0 117 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 ANXA2P2A6NMY6 339 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 FKBP6O75344 327 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 IGHV1-69P01742 117 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 HMGN1P05114 100 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 MUC1P15941 1255 aaPredicted RBP12.09□□□□□ -0.47
ATG4B-223ENST00000493618 SLC2A5P22732 501 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 DLX1P56177 255 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 APOFQ13790 326 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 FLOT2Q14254 428 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms