RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	REN	P00797	406 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	HLA-DQA2	P01906	255 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	HLA-DPB1	P04440	258 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	DUX4L4	P0CJ87	422 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	IGHV4-30-4	P0DP06	118 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	COX5B	P10606	129 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	GP9	P14770	177 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC6A1	P30531	599 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	OR1E2	P47887	323 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	UGT2B15	P54855	530 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	LGALS4	P56470	323 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	KLF10	Q13118	480 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	MAB21L1	Q13394	359 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	PMS2P11	Q13670	270 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	BLMH	Q13867	455 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	MPPED2	Q15777	294 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	ZBED5	Q49AG3	693 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	IFI44L	Q53G44	452 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	C10orf128	Q5T292	105 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	OR2T2	Q6IF00	324 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	HCP5	Q6MZN7	132 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	CPLX4	Q7Z7G2	160 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF329	Q86UD4	541 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	RBM45	Q8IUH3	476 aa	Known RBP	4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	GLB1L2	Q8IW92	636 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	MICU2	Q8IYU8	434 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	BHLHE23	Q8NDY6	225 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	NOXO1	Q8NFA2	376 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	GJC3	Q8NFK1	279 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	GPR32P1	Q8NGA4	272 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	OR51A7	Q8NH64	312 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	LIPH	Q8WWY8	451 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	ASB10	Q8WXI3	467 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	H1FX	Q92522	213 aa	Known RBP	4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	ERGIC1	Q969X5	290 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	DMRTB1	Q96MA1	342 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	TEX12	Q9BXU0	123 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	MRPL13	Q9BYD1	178 aa	Known RBP	4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC22A4	Q9H015	551 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	ANKRD19P	Q9H560	264 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	PPP1R3E	Q9H7J1	279 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	SP140L	Q9H930	580 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	NDE1	Q9NXR1	346 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	ADA2	Q9NZK5	511 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	SAMD4A	Q9UPU9	718 aa	Known RBP	4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	STARD10	Q9Y365	291 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	LYVE1	Q9Y5Y7	322 aa		4.25	□□□□□ -1.73
SEC13-219	ENST00000492602	IGHV3OR15-7	A0A075B7D8	119 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	TRBV5-3	A0A0A0MS03	114 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602		A0A1W2PQ09	198 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	PSMB11	A5LHX3	300 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	CXorf65	A6NEN9	183 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	OR6C6	A6NF89	314 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602		A6NJY4	79 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	FAM220BP	B1ANY3	271 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602		H0YAE9	185 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602		H3BUI4	141 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602		J3QW42	95 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602		M0R1W7	72 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	SGCE	O43556	437 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	IDH3B	O43837	385 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC16A7	O60669	478 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	KHDRBS3	O75525	346 aa	Known RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	GLCE	O94923	617 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	NDUFB2	O95178	105 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	APOC1	P02654	83 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	H1F0	P07305	194 aa	Known RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	CD14	P08571	375 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	RBMY1A1	P0DJD3	496 aa	Known RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	SPN	P16150	400 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	ZNF823	P16415	610 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	RHCE	P18577	417 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	TNFRSF1B	P20333	461 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	FPR3	P25089	353 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	LAP3	P28838	519 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	CDA	P32320	146 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	GSK3B	P49841	420 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	SLC7A2	P52569	658 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	LSM6	P62312	80 aa	Known RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	MXRA7	P84157	204 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	TAGLN	Q01995	201 aa	Known RBP	4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	LIPE	Q05469	1076 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	PRKCD	Q05655	676 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	FMOD	Q06828	376 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	IKZF1	Q13422	519 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	TAF13	Q15543	124 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	SNCB	Q16143	134 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	HIST3H3	Q16695	136 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	HAGH	Q16775	308 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	DEFB136	Q30KP8	78 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	FGD3	Q5JSP0	725 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	RNLS	Q5VYX0	342 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	C1orf94	Q6P1W5	598 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	DPY19L2P2	Q6ZN68	376 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	LINC00336	Q6ZUF6	198 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	MBOAT2	Q6ZWT7	520 aa		4.24	□□□□□ -1.73
SEC13-219	ENST00000492602	CBLL1	Q75N03	491 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms