RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 BHLHE23Q8NDY6 225 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 ITFG2Q969R8 447 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 C12orf43Q96C57 262 aaKnown RBP18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 DGCR14Q96DF8 476 aaKnown RBP18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 TMEM204Q9BSN7 226 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 FAM192AQ9GZU8 254 aa18.64■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF701M0R085 212 aaPredicted RBP18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 PLAUP00749 431 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF250P15622 560 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 GNALP38405 381 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 DDOSTP39656 456 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF442Q9H7R0 627 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 FLNBO75369 2602 aaKnown RBP18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 SHISA3A0PJX4 238 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 CSNK2A3Q8NEV1 391 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 CHST5Q9GZS9 411 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 TAS2R4Q9NYW5 299 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 CKLFQ9UBR5 152 aa18.63■□□□□ 0.57
VCPKMT-204ENST00000491402 TRAV8-7A0A075B6U6 113 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF816-ZNF321PA0A0X1KG74 233 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 IQCF6A8MYZ5 107 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 LILRA1O75019 489 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 SELEP16581 610 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 SRMP19623 302 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 FSTP19883 344 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 KITLGP21583 273 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 DAZAP2Q15038 168 aaPredicted RBP18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 ZBTB37Q5TC79 503 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF787Q6DD87 383 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 OR5AS1Q8N127 324 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 FTMTQ8N4E7 242 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 OR5D14Q8NGL3 314 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 SYNPRQ8TBG9 265 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 PP6455Q8WZ26 134 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 NEUROG1Q92886 237 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 PURGQ9UJV8 347 aaKnown RBP18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 RHBDD3Q9Y3P4 386 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 CMAHPQ9Y471 501 aa18.62■□□□□ 0.57
VCPKMT-204ENST00000491402 SLC22A1O15245 554 aa18.61■□□□□ 0.57
VCPKMT-204ENST00000491402 MYL9P24844 172 aa18.61■□□□□ 0.57
VCPKMT-204ENST00000491402 ALKBH6Q3KRA9 238 aa18.61■□□□□ 0.57
VCPKMT-204ENST00000491402 TMEM42Q69YG0 159 aa18.61■□□□□ 0.57
VCPKMT-204ENST00000491402 TCF7L1Q9HCS4 588 aa18.61■□□□□ 0.57
VCPKMT-204ENST00000491402 DUSP13Q9UII6 198 aa18.61■□□□□ 0.57
VCPKMT-204ENST00000491402 E7EQL1 145 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 IGFBP3P17936 291 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 KLF3P57682 345 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 SPCS2Q15005 226 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 ADIPOQQ15848 244 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 LRP11Q86VZ4 500 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF295-AS1Q8N0V1 137 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 NDNFQ8TB73 568 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 MRPL24Q96A35 216 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 SYT3Q9BQG1 590 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 PAPOLGQ9BWT3 736 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 MRPL37Q9BZE1 423 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 ZCCHC4Q9H5U6 513 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 FOXJ3Q9UPW0 622 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 HRNRQ86YZ3 2850 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 IGLV3-9A0A075B6K5 115 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 TRAV1-2A0A0B4J238 106 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 A6NNC1 897 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 TIMM8AO60220 97 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 IGHV3-13P01766 116 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 SDC2P34741 201 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 MTNR1BP49286 362 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 CLVS2Q5SYC1 327 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF529Q6P280 563 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 KRT74Q7RTS7 529 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 OR51A2Q8NGJ7 313 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 OR13C9Q8NGT0 318 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 LILRB1Q8NHL6 650 aaPredicted RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 UBASH3BQ8TF42 649 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 SNTG1Q9NSN8 517 aa18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 MRPL15Q9P015 296 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 MYEF2Q9P2K5 600 aaKnown RBP18.6■□□□□ 0.57
VCPKMT-204ENST00000491402 NBPF19A0A087WUL8 3843 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 GMDSO60547 372 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 OR4A8P0C604 315 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 PPP3R1P63098 170 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 ZNF672Q499Z4 452 aaPredicted RBP18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 USP43Q70EL4 1123 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 UTS2BQ765I0 119 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 PIGCQ92535 297 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 MARVELD3Q96A59 401 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 SLITRK2Q9H156 845 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 PPP1R3EQ9H7J1 279 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 CISD1Q9NZ45 108 aaKnown RBP18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 TACC2O95359 2948 aa18.59■□□□□ 0.57
VCPKMT-204ENST00000491402 ANKRD30BLA7E2S9 258 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 SULT1B1O43704 296 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 CDRT1O95170 752 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 CST4P01036 141 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 NRASP01111 189 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 RAB3AP20336 220 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 SERPINB10P48595 397 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 MXD1Q05195 221 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 UBE2V2Q15819 145 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 DMRTC1Q5HYR2 192 aa18.58■□□□□ 0.57
VCPKMT-204ENST00000491402 PIGTQ969N2 578 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms