RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SYT13Q7L8C5 426 aa17.15■□□□□ 0.34
SNAPC3-206ENST00000490969 DCXRQ7Z4W1 244 aa17.15■□□□□ 0.34
SNAPC3-206ENST00000490969 RAB3CQ96E17 227 aa17.15■□□□□ 0.34
SNAPC3-206ENST00000490969 SCRT1Q9BWW7 348 aa17.15■□□□□ 0.34
SNAPC3-206ENST00000490969 HRASLS2Q9NWW9 162 aa17.15■□□□□ 0.34
SNAPC3-206ENST00000490969 AMDHD2Q9Y303 409 aa17.15■□□□□ 0.34
SNAPC3-206ENST00000490969 WDR87Q6ZQQ6 2873 aa17.14■□□□□ 0.34
SNAPC3-206ENST00000490969 ARID1AO14497 2285 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 A0A1W2PPE2 198 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 K7EPK0 472 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 RGS19P49795 217 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 FAM3AP98173 230 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 LINC00346Q8IVM7 164 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 FAM71E2Q8N5Q1 922 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 ADAT3Q96EY9 351 aaPredicted RBP17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 SLC5A6Q9Y289 635 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 A0A0A6YYD4 124 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 NME1P15531 152 aaKnown RBP17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 FCGR2CP31995 323 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 RHEBQ15382 184 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 TOMM34Q15785 309 aaPredicted RBP17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF101Q8IZC7 436 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 COMMD1Q8N668 190 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 OR1J1Q8NGS3 322 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 MESP1Q9BRJ9 268 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 CNTNAP3Q9BZ76 1288 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 NRSN2Q9GZP1 204 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 LPAR5Q9H1C0 372 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 FAM60AQ9NP50 221 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 FBLN5Q9UBX5 448 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 PRODH2Q9UF12 536 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 FRYLO94915 3013 aa17.14■□□□□ 0.33
SNAPC3-206ENST00000490969 UMAD1C9J7I0 102 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 NME2P1O60361 137 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 IFNA17P01571 189 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 CLPSP04118 112 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 CHRM2P08172 466 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 RPS2P15880 293 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 THBS4P35443 961 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 GPX4P36969 197 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 SSTP61278 116 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 PLAC9Q5JTB6 97 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 ARHGEF39Q8N4T4 335 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 OR5H2Q8NGV7 314 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 ST7LQ8TDW4 575 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 SMIM3Q9BZL3 60 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 WISP1O95388 367 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 IL33O95760 270 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 KLK3P07288 261 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 GSTP1P09211 210 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF823P16415 610 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 GLRA1P23415 457 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 TMEM33P57088 247 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF117Q03924 483 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF239Q16600 458 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 OPN5Q6U736 354 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 C1QL4Q86Z23 238 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF565Q8N9K5 539 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 OR13C9Q8NGT0 318 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 OR13G1Q8NGZ3 307 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 RTN4RQ9BZR6 473 aa17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 EIF5A2Q9GZV4 153 aaKnown RBP17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 FAM212BQ9NTI7 297 aaPredicted RBP17.13■□□□□ 0.33
SNAPC3-206ENST00000490969 SLC34A2O95436 690 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 MT-ATP6P00846 226 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 HOXC4P09017 264 aaPredicted RBP17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 CRABP1P29762 137 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 ZNF616Q08AN1 781 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 AADACL3Q5VUY0 350 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 LHFPL1Q86WI0 220 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 TSTD1Q8NFU3 115 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 CYYR1Q96J86 154 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 C17orf51A8MQB3 221 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 RHPN2P1A8MT19 583 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 CLDN4O14493 209 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 SOCS1O15524 211 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 HCRTR2O43614 444 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 IFNA2P01563 188 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 HIST1H1DP16402 221 aaKnown RBP17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 AKT2P31751 481 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 UCP2P55851 309 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 DEFA6Q01524 100 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 PYY3Q5JQD4 70 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 NSUN5P2Q63ZY6 315 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 KIAA0895LQ68EN5 471 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 TMEM104Q8NE00 496 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 OR56B1Q8NGI3 324 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 CENPMQ9NSP4 180 aa17.12■□□□□ 0.33
SNAPC3-206ENST00000490969 CPAMD8Q8IZJ3 1885 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 YIF1AO95070 293 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 IGLV3-19P01714 112 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 HOXA5P20719 270 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 SLC6A8P48029 635 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 IAH1Q2TAA2 248 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 SLC26A10Q8NG04 563 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 OIT3Q8WWZ8 545 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 RELTQ969Z4 430 aa17.11■□□□□ 0.33
SNAPC3-206ENST00000490969 OSGIN2Q9Y236 505 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms