RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TECTBQ96PL2 329 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 SMAD5Q99717 465 aaKnown RBP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 PRRT1Q99946 306 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 ULBP2Q9BZM5 246 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF436Q9C0F3 470 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 RGCCQ9H4X1 137 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 RNF122Q9H9V4 155 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.43□□□□□ -1.22
VTI1A-207ENST00000489357 TPSG1Q9NRR2 321 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 V9GYS6 101 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 FREM3P0C091 2139 aa7.43□□□□□ -1.22
VTI1A-207ENST00000489357 KIAA1549Q9HCM3 1950 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 CFAP46Q8IYW2 2715 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 IGKV3D-15A0A087WSY6 115 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 A0A0J9YW62 118 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 LRRC3CA6NJW4 275 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF716A6NP11 495 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 A8MV72 311 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 TMEM14DPA8MWL7 114 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 RAB27BO00194 218 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ARPC1BO15143 372 aaKnown RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 SMAD9O15198 467 aaKnown RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 RER1O15258 196 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 FABP7O15540 132 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 CYTIPO60759 359 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 CA11O75493 328 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 DHRS3O75911 302 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 C1QL1O75973 258 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 OR2A4O95047 310 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 HPNP05981 417 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 GSTT2P0CG29 244 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 TMIGD3P0DMS9 266 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 GTF2F2P13984 249 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 VEGFCP49767 419 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 EFNB2P52799 333 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 GFRA1P56159 465 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 DHODHQ02127 395 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 SPOCK1Q08629 439 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 Q0VFX4 171 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 LY6DQ14210 128 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ENDOGQ14249 297 aaKnown RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ABHD17BQ5VST6 288 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 LPCAT3Q6P1A2 487 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 FAHD2BQ6P2I3 314 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ABHD12BQ7Z5M8 362 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 GGNQ86UU5 652 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF584Q8IVC4 421 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 WDFY1Q8IWB7 410 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 GABRG1Q8N1C3 465 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF283Q8N7M2 679 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ZIC4Q8N9L1 334 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 OR8B12Q8NGG6 310 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 OR4C16Q8NGL9 310 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 OR5M1Q8NGP8 315 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 SSC4DQ8WTU2 575 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 PSMF1Q92530 271 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 SPSB1Q96BD6 273 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ADAT3Q96EY9 351 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 FAHD2AQ96GK7 314 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ADGRG7Q96K78 797 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 FER1L6-AS2Q96M78 137 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 JSRP1Q96MG2 331 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 SFXN2Q96NB2 322 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 OR2A7Q96R45 310 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 URM1Q9BTM9 101 aaKnown RBP7.42□□□□□ -1.22
VTI1A-207ENST00000489357 RSRP1Q9BUV0 290 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF416Q9BWM5 594 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 LINC00470Q9BZP3 86 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 CST11Q9H112 138 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 CNTD2Q9H8S5 307 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF222Q9UK12 451 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 PLEKHA6Q9Y2H5 1048 aa7.42□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF736B4DX44 427 aaPredicted RBP7.41□□□□□ -1.22
VTI1A-207ENST00000489357 DISC1C4P0D8 188 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 TNFSF11O14788 317 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 RAMP1O60894 148 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF780AO75290 641 aaPredicted RBP7.41□□□□□ -1.22
VTI1A-207ENST00000489357 KDM4BO94953 1096 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 RAB3DO95716 219 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF24P17028 368 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 NAT1P18440 290 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 MFAP5Q13361 173 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 GK2Q14410 553 aaPredicted RBP7.41□□□□□ -1.22
VTI1A-207ENST00000489357 SGCAQ16586 387 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 HYAL4Q2M3T9 481 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 KRTAP27-1Q3LI81 207 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF260Q3ZCT1 412 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 RNASE12Q5GAN4 147 aaKnown RBP7.41□□□□□ -1.22
VTI1A-207ENST00000489357 CLVS2Q5SYC1 327 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 ZBTB37Q5TC79 503 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 CARD17Q5XLA6 110 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 SLC16A14Q7RTX9 510 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 SLC36A1Q7Z2H8 476 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 ZNF100Q8IYN0 542 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 C9orf62Q8N4C0 152 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 ZDHHC22Q8N966 263 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 STEAP2Q8NFT2 490 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 OR56B1Q8NGI3 324 aa7.41□□□□□ -1.22
VTI1A-207ENST00000489357 OR4D6Q8NGJ1 314 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms