RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SLC35D3Q5M8T2 416 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4L9Q6RFH8 374 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-206ENST00000489142 C12orf54Q6X4T0 127 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 KRT77Q7Z794 578 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 FAM90A1Q86YD7 464 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 C11orf53Q8IXP5 236 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 PARP8Q8N3A8 854 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 FGFRL1Q8N441 504 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 SPERTQ8NA61 448 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 OR1M1Q8NGA1 313 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 NRBF2Q96F24 287 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 TEX12Q9BXU0 123 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 FGF23Q9GZV9 251 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-206ENST00000489142 SP140LQ9H930 580 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 KRT84Q9NSB2 600 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 C14orf119Q9NWQ9 140 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 DUX4Q9UBX2 424 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 COPS3Q9UNS2 423 aa11.66□□□□□ -0.54
VTI1A-206ENST00000489142 MDFIC2A0A1B0GVS7 189 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 DNAJC9-AS1A6NH13 148 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 ZNF850A8MQ14 1090 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 G3V2T6 193 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 PHYHO14832 338 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 TFF1P04155 84 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 ALOX5APP20292 161 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 GNALP38405 381 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 DDOSTP39656 456 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 PSMA6P60900 246 aaKnown RBP11.65□□□□□ -0.54
VTI1A-206ENST00000489142 UBA52P62987 128 aaKnown RBP11.65□□□□□ -0.54
VTI1A-206ENST00000489142 PRDX4Q13162 271 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 BRD3OSQ6XYD6 125 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 RHOUQ7L0Q8 258 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 PLPP7Q8NBV4 271 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 FAM216AQ8WUB2 273 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 ZFAND2BQ8WV99 257 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 LRTOMTQ8WZ04 291 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 PIGCQ92535 297 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 GCDHQ92947 438 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-206ENST00000489142 TEAD3Q99594 435 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 MS4A7Q9GZW8 240 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-206ENST00000489142 SEMA6AQ9H2E6 1030 aa11.65□□□□□ -0.54
VTI1A-206ENST00000489142 TRAV38-1A0A0B4J264 116 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 KIR2DS1A0A191URI9 304 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 CDIPTO14735 213 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 TNFRSF13BO14836 293 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-206ENST00000489142 MAGEB4O15481 346 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-206ENST00000489142 LHBP01229 141 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 SFTPBP07988 381 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
VTI1A-206ENST00000489142 MZT1Q08AG7 82 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 WDR82Q6UXN9 313 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 RBMS3Q6XE24 437 aaKnown RBP11.64□□□□□ -0.55
VTI1A-206ENST00000489142 KCTD8Q6ZWB6 473 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 COMMD2Q86X83 199 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 TCEANCQ8N8B7 351 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 CSNK2A3Q8NEV1 391 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 DNAJC9Q8WXX5 260 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 TAF15Q92804 592 aaKnown RBP eCLIP11.64□□□□□ -0.55
VTI1A-206ENST00000489142 RPL3LQ92901 407 aaKnown RBP11.64□□□□□ -0.55
VTI1A-206ENST00000489142 PPP1R14AQ96A00 147 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 UPRTQ96BW1 309 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 ITPKCQ96DU7 683 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 C1orf147Q96MC9 270 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-206ENST00000489142 PCGF1Q9BSM1 259 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 FAM206AQ9NX38 181 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 ERVK-18Q9QC07 812 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 AP4S1Q9Y587 144 aa11.64□□□□□ -0.55
VTI1A-206ENST00000489142 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-206ENST00000489142 TMPRSS2O15393 492 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 ENSAO43768 121 aaKnown RBP11.63□□□□□ -0.55
VTI1A-206ENST00000489142 CPT2P23786 658 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 FASP25445 335 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 CFPP27918 469 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 RASSF2P50749 326 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 ESRRGP62508 458 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 MFGE8Q08431 387 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-206ENST00000489142 BAMBIQ13145 260 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 KCNJ8Q15842 424 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 LCN1P1Q5VSP4 162 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 PLEKHG7Q6ZR37 379 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 DOK3Q7L591 496 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 OR5T2Q8NGG2 359 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 HPSE2Q8WWQ2 592 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 ST8SIA4Q92187 359 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 FAM71F1Q96KD3 344 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-206ENST00000489142 IL4I1Q96RQ9 567 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 CNN2Q99439 309 aaKnown RBP11.63□□□□□ -0.55
VTI1A-206ENST00000489142 CCL13Q99616 98 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 PKP2Q99959 881 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 MICU1Q9BPX6 476 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 RTL8AQ9BWD3 113 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 YIPF3Q9GZM5 350 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 WDR13Q9H1Z4 485 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 RGCCQ9H4X1 137 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 NIPAL2Q9H841 368 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 SNTG1Q9NSN8 517 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 IKZF2Q9UKS7 526 aa11.63□□□□□ -0.55
VTI1A-206ENST00000489142 GTF2A1LQ9UNN4 478 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms