RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 ACSM4P0C7M7 580 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 IGHV4-31P0DP07 118 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OTX1P32242 354 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 PYCR1P32322 319 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 MPV17P39210 176 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 MAGEB1P43366 347 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 SRP9P49458 86 aaKnown RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ERVS71-1P61550 626 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 TNFAIP6P98066 277 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 CDK5Q00535 292 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 PSG7Q13046 419 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 SCGB2A2Q13296 93 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 EIF2B1Q14232 305 aaKnown RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 GINS1Q14691 196 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 PCK2Q16822 640 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ALKBH6Q3KRA9 238 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 KRTAP27-1Q3LI81 207 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 CHRFAM7AQ494W8 412 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF362Q5T0B9 420 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 FAHD1Q6P587 224 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 KCTD18Q6PI47 426 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 CORO6Q6QEF8 472 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 CFAP77Q6ZQR2 320 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 COLCA1Q6ZS62 124 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 PGAP1Q75T13 922 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ASRGL1Q7L266 308 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 MRPL21Q7Z2W9 205 aaKnown RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 DCXRQ7Z4W1 244 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 FAM90A1Q86YD7 464 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 KLBQ86Z14 1044 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ERI1Q8IV48 349 aaKnown RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 C1orf87Q8N0U7 546 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ZCCHC24Q8N2G6 241 aaKnown RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 PRR18Q8N4B5 295 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OR8G5Q8NG78 346 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OR2Z1Q8NG97 314 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OR52H1Q8NGJ2 320 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OR9Q1Q8NGQ5 310 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OR6N2Q8NGY6 317 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OR13G1Q8NGZ3 307 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 OR4Q3Q8NH05 313 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ITFG2Q969R8 447 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 SLAMF6Q96DU3 332 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 CENPNQ96H22 339 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 DDOQ99489 341 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 RBM4BQ9BQ04 359 aaKnown RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 TINAGL1Q9GZM7 467 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 SHARPINQ9H0F6 387 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 GABARAPL1Q9H0R8 117 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 PRDM13Q9H4Q3 707 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 NIPAL2Q9H841 368 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF275Q9NSD4 429 aaPredicted RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 MRPL22Q9NWU5 206 aaKnown RBP4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF391Q9UJN7 358 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 KCNS2Q9ULS6 477 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 STARD10Q9Y365 291 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 ORC6Q9Y5N6 252 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 CSPG4Q6UVK1 2322 aa4.33□□□□□ -1.72
SF3A3-207ENST00000488934 IGHV4-61A0A0C4DH41 118 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 TVP23AA6NH52 213 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 FAM183AA6NL82 134 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 LRRC30A6NM36 301 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 INAFM1C9JVW0 142 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF593O00488 134 aaPredicted RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 MGST3O14880 152 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 GMDSO60547 372 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 LMX1BO60663 402 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 RP2O75695 350 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 GYPBP06028 91 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 IGFBP1P08833 259 aaPredicted RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 H2BFMP0C1H6 154 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 CLUP10909 449 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 IRF2P14316 349 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 PRKACGP22612 351 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 CPT2P23786 658 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 IGFBP5P24593 272 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 DDOSTP39656 456 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 ERFP50548 548 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 CRISP1P54107 249 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 ACTR3P61158 418 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 GK2Q14410 553 aaPredicted RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 PTGES3Q15185 160 aaKnown RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 SNAPC1Q16533 368 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 TSTQ16762 297 aaKnown RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 KLHL12Q53G59 568 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 LINC01590Q5TEZ4 76 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 KDM4DQ6B0I6 523 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 SFRP4Q6FHJ7 346 aaPredicted RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 PLBD1Q6P4A8 553 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 DEGS2Q6QHC5 323 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 Q71RC1 249 aaPredicted RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 TMEM179BQ7Z7N9 219 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 GLCCI1Q86VQ1 547 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 GID4Q8IVV7 300 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 MUC20Q8N307 709 aaPredicted RBP4.32□□□□□ -1.72
SF3A3-207ENST00000488934 SPICQ8N5J4 248 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 ZNF283Q8N7M2 679 aa4.32□□□□□ -1.72
SF3A3-207ENST00000488934 SPERTQ8NA61 448 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms