RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 SGTBQ96EQ0 304 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 IGF2BP2-AS1Q96M15 143 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 XPO6Q96QU8 1125 aaKnown RBP0.83□□□□□ -2.28
SMC4-219ENST00000487747 TEAD3Q99594 435 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 KCNS3Q9BQ31 491 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 ZYG11BQ9C0D3 744 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 DAZ1Q9NQZ3 744 aaKnown RBP0.83□□□□□ -2.28
SMC4-219ENST00000487747 TAS2R5Q9NYW4 299 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 CLN8Q9UBY8 286 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 FARSAQ9Y285 508 aaKnown RBP0.83□□□□□ -2.28
SMC4-219ENST00000487747 HES2Q9Y543 173 aa0.83□□□□□ -2.28
SMC4-219ENST00000487747 A0A0A6YYD5 115 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 GOLGA8OA6NCC3 632 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 OR2AG2A6NM03 316 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 A8MWL6 223 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 CENPBD1B2RD01 187 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 GOLGA8NF8WBI6 632 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 CLDN34H7C241 214 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 NME4O00746 187 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 SLC9A3R1O14745 358 aaPredicted RBP0.82□□□□□ -2.28
SMC4-219ENST00000487747 SLC16A7O60669 478 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 CCDC22O60826 627 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 FGFR1OPO95684 399 aaKnown RBP0.82□□□□□ -2.28
SMC4-219ENST00000487747 LSM8O95777 96 aaKnown RBP0.82□□□□□ -2.28
SMC4-219ENST00000487747 TRBV12-3P01733 135 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 IGHV1-46P01743 117 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 MMP7P09237 267 aaPredicted RBP0.82□□□□□ -2.28
SMC4-219ENST00000487747 HSPD1P10809 573 aaKnown RBP0.82□□□□□ -2.28
SMC4-219ENST00000487747 MYL2P10916 166 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 PCK1P35558 622 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 BIKQ13323 160 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 ARMC12Q5T9G4 340 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 PRAMEF20Q5VT98 475 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 AMMECR1LQ6DCA0 310 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 TMPRSS11AQ6ZMR5 421 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 UBAC2Q8NBM4 344 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 S100PBPQ96BU1 408 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 FAM19A4Q96LR4 140 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 PDCD1LG2Q9BQ51 273 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 C20orf24Q9BUV8 137 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 ACP6Q9NPH0 428 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 AGPAT4Q9NRZ5 378 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 HMGXB4Q9UGU5 601 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 RCL1Q9Y2P8 373 aaKnown RBP0.82□□□□□ -2.28
SMC4-219ENST00000487747 ZNF257Q9Y2Q1 563 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 PLXNA3P51805 1871 aa0.82□□□□□ -2.28
SMC4-219ENST00000487747 IGKV1-6A0A0C4DH72 117 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 ANKRD65E5RJM6 399 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 M0R1X1 148 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 PSPHP1O15172 72 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 AQP9O43315 295 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 SCO1O75880 301 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 TGM6O95932 706 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 IGKV1-39P01597 117 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 KRT14P02533 472 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 IGKV1D-39P04432 117 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 TACSTD2P09758 323 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 MYL9P24844 172 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 STOMP27105 288 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 KDSRQ06136 332 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 NAB1Q13506 487 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 IDI1Q13907 227 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 ALKBH6Q3KRA9 238 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 ZNF678Q5SXM1 525 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 ZNF470Q6ECI4 717 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 TMEM220Q6QAJ8 160 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 WDR82Q6UXN9 313 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 ORMDL3Q8N138 153 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 TTC29Q8NA56 475 aaPredicted RBP0.81□□□□□ -2.28
SMC4-219ENST00000487747 OR56A4Q8NGH8 313 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 DCAKDQ8WVC6 231 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 SMARCD1Q96GM5 515 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 EMC6Q9BV81 110 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 UCK2Q9BZX2 261 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 DUSP21Q9H596 190 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 MRM3Q9HC36 420 aaKnown RBP0.81□□□□□ -2.28
SMC4-219ENST00000487747 ZNF160Q9HCG1 818 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 ZNF302Q9NR11 478 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 DYRK4Q9NR20 520 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 TMEM106BQ9NUM4 274 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 RBFOX1Q9NWB1 397 aaKnown RBP0.81□□□□□ -2.28
SMC4-219ENST00000487747 LYARQ9NX58 379 aaKnown RBP0.81□□□□□ -2.28
SMC4-219ENST00000487747 RWDD2AQ9UIY3 292 aa0.81□□□□□ -2.28
SMC4-219ENST00000487747 BRCA1P38398 1863 aaKnown RBP0.81□□□□□ -2.28
SMC4-219ENST00000487747 RP1L1Q8IWN7 2480 aaPredicted RBP0.8□□□□□ -2.28
SMC4-219ENST00000487747 KCNE1BA0A087WTH5 132 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 SYNJ2BP-COX16A0A087WUM0 186 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 KBTBD11-OT1A0A1B0GTJ5 212 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 CTNSO60931 367 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 LCA5LO95447 670 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 IGHG2P01859 326 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 MAS1P04201 325 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 CBR1P16152 277 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 GABRG2P18507 467 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 HLA-DMAP28067 261 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 MPIP34949 423 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 GGT2P36268 569 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 ZNF33AQ06730 810 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 C6orf99Q4VX62 202 aa0.8□□□□□ -2.28
SMC4-219ENST00000487747 MFSD14CQ5VZR4 134 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms