RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 POLR2IP36954 125 aaKnown RBP5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 CDK5Q00535 292 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 COX10Q12887 443 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 GK3PQ14409 553 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 PPA1Q15181 289 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 THEM4Q5T1C6 240 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NCMAPQ5T1S8 102 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 C10orf128Q5T292 105 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 OTPQ5XKR4 325 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 ACSM5Q6NUN0 579 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 FAHD1Q6P587 224 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 SKA3Q8IX90 412 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 SLC22A24Q8N4F4 322 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NPEPL1Q8NDH3 523 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NOXO1Q8NFA2 376 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 OR4Q3Q8NH05 313 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 OR4K13Q8NH42 304 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 FANK1Q8TC84 345 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 MAGEE2Q8TD90 523 aaPredicted RBP5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 ZNRF4Q8WWF5 429 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NSMAFQ92636 917 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NRGNQ92686 78 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 MUCL1Q96DR8 90 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NRBF2Q96F24 287 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 PIK3IP1Q96FE7 263 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 CENPNQ96H22 339 aaPredicted RBP5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 FOXN4Q96NZ1 517 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 TSSK2Q96PF2 358 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 RAB3IPQ96QF0 476 aaPredicted RBP5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 RBP7Q96R05 134 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 ABHD1Q96SE0 405 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NMNAT3Q96T66 252 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 SH3GL3Q99963 347 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 ALG12Q9BV10 488 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 TSSK6Q9BXA6 273 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 PLEKHF2Q9H8W4 249 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 NOX3Q9HBY0 568 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 S100A14Q9HCY8 104 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 B3GAT2Q9NPZ5 323 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 TMEM38BQ9NVV0 291 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 ZNF226Q9NYT6 803 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 POFUT2Q9Y2G5 429 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 CDH10Q9Y6N8 788 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 RYR1P21817 5038 aa5.3□□□□□ -1.56
RTFDC1-209ENST00000487211 AKAP6Q13023 2319 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.29□□□□□ -1.561e-5■■■■□ 21.5
RTFDC1-209ENST00000487211 ARPC4-TTLL3A0A0A6YYG9 625 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 IGHV1-18A0A0C4DH31 117 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 ERICH4A6NGS2 130 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 A6NIZ1 184 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 IDH3BO43837 385 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SLC16A7O60669 478 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 MPZL1O95297 269 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 CD79AP11912 226 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 CBR1P16152 277 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 CTLA4P16410 223 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 GSTM3P21266 225 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 EPHA2P29317 976 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SLC6A6P31641 620 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 ZNF83P51522 516 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 ARHGDIAP52565 204 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 RAP1BP61224 184 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 RAP1AP62834 184 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 BSPH1Q075Z2 132 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 CD47Q08722 323 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 KRR1Q13601 381 aaKnown RBP5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 GINS1Q14691 196 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SGCAQ16586 387 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SLC36A3Q495N2 470 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 IGSF11Q5DX21 431 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 BEX5Q5H9J7 111 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 TMEM236Q5W0B7 351 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 KDM4DQ6B0I6 523 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 LEG1Q6P5S2 330 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 UGT2A3Q6UWM9 527 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SPNS3Q6ZMD2 512 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 MYPOPQ86VE0 399 aaPredicted RBP5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 CDC20BQ86Y33 519 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 HIPK1Q86Z02 1210 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 OR6V1Q8N148 313 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 LRRC18Q8N456 261 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 C17orf78Q8N4C9 275 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 IQCF1Q8N6M8 205 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 CYB561A3Q8NBI2 242 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 OR2AK2Q8NG84 335 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 OR52E2Q8NGJ4 325 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 NEUROG1Q92886 237 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 PTP4A1Q93096 173 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 NABP1Q96AH0 204 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 TMEM204Q9BSN7 226 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SYT4Q9H2B2 425 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SIAEQ9HAT2 523 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 STX18Q9P2W9 335 aaKnown RBP5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 B9D1Q9UPM9 204 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 AMDHD2Q9Y303 409 aa5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 HRNRQ86YZ3 2850 aaPredicted RBP5.29□□□□□ -1.56
RTFDC1-209ENST00000487211 SVEP1Q4LDE5 3571 aa5.28□□□□□ -1.56
RTFDC1-209ENST00000487211 IGLV1-36A0A0B4J1U3 117 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms