RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 ZNF878C9JN71 531 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 H0YIZ8 118 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 CDC14BO60729 498 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 IFNA6P05013 189 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 PGAM2P15259 253 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 PI3P19957 117 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 DEFA5Q01523 94 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 NKAIN1Q4KMZ8 207 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 DTX1Q86Y01 620 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 FAM219AQ8IW50 185 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 OR5AP2Q8NGF4 316 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 PHYHIPLQ96FC7 376 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 C5orf66Q9H5L9 145 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 ANAPC10Q9UM13 185 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 PCDHB10Q9UN67 800 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 POLR1DQ9Y2S0 133 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 CSAG2Q9Y5P2 127 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 CNOT1A5YKK6 2376 aaKnown RBP13.11□□□□□ -0.31
ATG4B-220ENST00000482507 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 C5orf51A6NDU8 294 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 NTN3O00634 580 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-220ENST00000482507 ACP1P24666 158 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 GSK3AP49840 483 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 NPY4RP50391 375 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 ZNF41P51814 821 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-220ENST00000482507 GFOD2Q3B7J2 385 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 SLC25A53Q5H9E4 307 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 LCN10Q6JVE6 187 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 FAM122CQ6P4D5 195 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 SLC25A47Q6Q0C1 308 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 CRIP3Q6Q6R5 217 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 TMEM41AQ96HV5 264 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 MRGPRX4Q96LA9 322 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 NUDT16L1Q9BRJ7 211 aaKnown RBP13.11□□□□□ -0.31
ATG4B-220ENST00000482507 SLC7A5P2Q9GIP4 190 aa13.11□□□□□ -0.31
ATG4B-220ENST00000482507 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-220ENST00000482507 OR2J2O76002 312 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 CCL4P13236 92 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
ATG4B-220ENST00000482507 PSMB6P28072 239 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 MC2RQ01718 297 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 KMT5CQ86Y97 462 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 TERB2Q8NHR7 220 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 RAB3CQ96E17 227 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 PISDQ9UG56 409 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 B3GALT1Q9Y5Z6 326 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 ADAP1O75689 374 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 PLATP00750 562 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 IGHG1P01857 330 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 TBPP20226 339 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 NBL1P41271 181 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 AKR1C2P52895 323 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 AKR1C1Q04828 323 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 NAA40Q86UY6 237 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 ZSCAN4Q8NAM6 433 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-220ENST00000482507 INO80EQ8NBZ0 244 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-220ENST00000482507 PIK3IP1Q96FE7 263 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 ARHGAP5-AS1Q96IT6 56 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 GPR132Q9UNW8 380 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 SRPK3Q9UPE1 567 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 WIF1Q9Y5W5 379 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 KNTC1P50748 2209 aa13.1□□□□□ -0.31
ATG4B-220ENST00000482507 CHRM2P08172 466 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 SUPT4H1P63272 117 aaKnown RBP13.09□□□□□ -0.31
ATG4B-220ENST00000482507 GABREP78334 506 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 SLC9A3R2Q15599 337 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 C1QL2Q7Z5L3 287 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 OR2AJ1Q8NGZ0 328 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 SSC4DQ8WTU2 575 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 CYTL1Q9NRR1 136 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 ASF1BQ9NVP2 202 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 PCNX2A6NKB5 2137 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 TRBV6-7A0A0A0MS04 114 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 PMS2P1A4D2B8 440 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 MSGN1A6NI15 193 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 F8VVB4 439 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 F8VWA3 439 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 SCGNO76038 276 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 SFTPDP35247 375 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 CX3CR1P49238 355 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 FAM57BQ71RH2 274 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 OR4K17Q8NGC6 315 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 ELP5Q8TE02 316 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 DCUN1D4Q92564 292 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 LIN37Q96GY3 246 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-220ENST00000482507 NARS2Q96I59 477 aaKnown RBP13.09□□□□□ -0.31
ATG4B-220ENST00000482507 METTL7AQ9H8H3 244 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 SDHAF3Q9NRP4 125 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 MYOTQ9UBF9 498 aa13.09□□□□□ -0.31
ATG4B-220ENST00000482507 DCHS1Q96JQ0 3298 aa13.08□□□□□ -0.31
ATG4B-220ENST00000482507 IGLV3-32A0A0A0MS00 114 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 TEX13DA0A0J9YY54 714 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 A0A1B0GW55 424 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 MFNGO00587 321 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 FGF16O43320 207 aa13.08□□□□□ -0.32
ATG4B-220ENST00000482507 CRTAPO75718 401 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-220ENST00000482507 HCKP08631 526 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 243.7 ms