RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 UCHL1P09936 223 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 CECR9P0C854 216 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 CBR1P16152 277 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 CCL1P22362 96 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 STOMP27105 288 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 MAPK3P27361 379 aaPredicted RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 APLNRP35414 380 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 UGT2B10P36537 528 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 IDH3GP51553 393 aaPredicted RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 FAM27E3Q08E93 113 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 TAB1Q15750 504 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 ODF4Q2M2E3 257 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 CNPY1Q3B7I2 92 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 SNAI3Q3KNW1 292 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 C3orf36Q3SXR2 165 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 Q499Y3 187 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 ACSM3Q53FZ2 586 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 ZMAT1Q5H9K5 638 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 FAM27D1Q5T7N8 215 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 TMEM244Q5VVB8 128 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 C22orf42Q6IC83 251 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 MTFR2Q6P444 385 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 UNQ9370/PRO34162Q6UXP9 181 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 COLCA1Q6ZS62 124 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 USP43Q70EL4 1123 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 NAA40Q86UY6 237 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 RDH10Q8IZV5 341 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 ZNF843Q8N446 348 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 PAQR4Q8N4S7 273 aaPredicted RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 STPG3Q8N7X2 389 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 SLC30A7Q8NEW0 376 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 KBTBD8Q8NFY9 601 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 OR51A4Q8NGJ6 313 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 OR51E1Q8TCB6 317 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 GPR148Q8TDV2 347 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 PGAM5Q96HS1 289 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 LYZL4Q96KX0 146 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 DERL3Q96Q80 235 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 OR14A2Q96R54 314 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 KCNS3Q9BQ31 491 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 OR10A2Q9H208 303 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 MOV10Q9HCE1 1003 aaKnown RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 GPR84Q9NQS5 396 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 DLL4Q9NR61 685 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 COQ3Q9NZJ6 369 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 ERRFI1Q9UJM3 462 aaPredicted RBP5.74□□□□□ -1.49
USP48-208ENST00000479177 HHLA2Q9UM44 414 aa5.74□□□□□ -1.49
USP48-208ENST00000479177 RELNP78509 3460 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 IGHV1-18A0A0C4DH31 117 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 hCG_38984A0A1B0GV85 526 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 A0A1B0GVI7 797 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 NKX2-6A6NCS4 301 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 H3BSH0 61 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 PIN1P1O15428 100 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 AGFG2O95081 481 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 LCATP04180 440 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 OCM2P0CE71 109 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 CCL2P13500 99 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 PAX7P23759 505 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 PCSK6P29122 969 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 WNT5AP41221 380 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 MAGEB1P43366 347 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 SOX2P48431 317 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 SERPINB10P48595 397 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 MTNR1BP49286 362 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 PPA1Q15181 289 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 CDSNQ15517 529 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 TBC1D28Q2M2D7 210 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 GFOD2Q3B7J2 385 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 TMEM177Q53S58 311 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 GLYATL3Q5SZD4 288 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 PAMR1Q6UXH9 720 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 Q6ZSR3 168 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 RFPL4BQ6ZWI9 263 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 CEACAM19Q7Z692 300 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 NUDT10Q8NFP7 164 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 OR52H1Q8NGJ2 320 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 OR1J2Q8NGS2 313 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 OR13C3Q8NGS6 347 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 LILRB4Q8NHJ6 448 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 DYNC2LI1Q8TCX1 351 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 TSEN15Q8WW01 171 aaKnown RBP5.73□□□□□ -1.49
USP48-208ENST00000479177 PHYHIPQ92561 330 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 THRSPQ92748 146 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 RNASE6Q93091 150 aaKnown RBP5.73□□□□□ -1.49
USP48-208ENST00000479177 SPSB4Q96A44 273 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 APOBEC3DQ96AK3 386 aaPredicted RBP5.73□□□□□ -1.49
USP48-208ENST00000479177 NUDT11Q96G61 164 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 FAM71F1Q96KD3 344 aaPredicted RBP5.73□□□□□ -1.49
USP48-208ENST00000479177 KCTD7Q96MP8 289 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 SOX7Q9BT81 388 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 MED18Q9BUE0 208 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 DCSTAMPQ9H295 470 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 PPIL3Q9H2H8 161 aaKnown RBP5.73□□□□□ -1.49
USP48-208ENST00000479177 SP140LQ9H930 580 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 CDH20Q9HBT6 801 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 NOX4Q9NPH5 578 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 PTTG2Q9NZH5 202 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 NPAP1Q9NZP6 1156 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 ZNF391Q9UJN7 358 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms