RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FADS6Q8N9I5 356 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 PTX4Q96A99 478 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 PHB2Q99623 299 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 PRRT1Q99946 306 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 ST6GALNAC5Q9BVH7 336 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 SLCO5A1Q9H2Y9 848 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 SMOC1Q9H4F8 434 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 SHPKQ9UHJ6 478 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 CSAG2Q9Y5P2 127 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 A0A0G2JMM0 328 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 A0A1W2PPB8 328 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 A0A1W2PRS3 328 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 KIR3DP1A8MWS1 328 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 BCL2L11O43521 198 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 ZNF205O95201 554 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 PATE4P0C8F1 98 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 UBBP0CG47 229 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 GPR85P60893 370 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 RPS18P62269 152 aaKnown RBP9.51□□□□□ -0.89
VPS52-217ENST00000478934 RPS27AP62979 156 aaKnown RBP9.51□□□□□ -0.89
VPS52-217ENST00000478934 UBA52P62987 128 aaKnown RBP9.51□□□□□ -0.89
VPS52-217ENST00000478934 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
VPS52-217ENST00000478934 MC2RQ01718 297 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 HIST3H3Q16695 136 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 HSD17B13Q7Z5P4 300 aaPredicted RBP9.51□□□□□ -0.89
VPS52-217ENST00000478934 NAXEQ8NCW5 288 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 DCUN1D4Q92564 292 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 RAB3CQ96E17 227 aa9.51□□□□□ -0.89
VPS52-217ENST00000478934 RRNAD1Q96FB5 475 aaKnown RBP9.51□□□□□ -0.89
VPS52-217ENST00000478934 RBM24Q9BX46 236 aaKnown RBP9.51□□□□□ -0.89
VPS52-217ENST00000478934 GPR179Q6PRD1 2367 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 A0A0A6YYH2 397 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 A6NJ64 397 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 ZIC3O60481 467 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 NTF4P34130 210 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 UBE2V2Q15819 145 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 RAB12Q6IQ22 244 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 GALNTL5Q7Z4T8 443 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 OR14K1Q8NGZ2 314 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 THAP6Q8TBB0 222 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PAQR8Q8TEZ7 354 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 MITD1Q8WV92 249 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PIGTQ969N2 578 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 UQCC2Q9BRT2 126 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 DUSP23Q9BVJ7 150 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 MED9Q9NWA0 146 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PCDHB10Q9UN67 800 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 IGHV1-45A0A0A0MS14 117 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 A0A0D9SG52 128 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PMS2P1A4D2B8 440 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 MSGN1A6NI15 193 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 GPR31O00270 319 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 TNFSF11O14788 317 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 KLF7O75840 302 aaPredicted RBP9.5□□□□□ -0.89
VPS52-217ENST00000478934 CD63P08962 238 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 CNR1P21554 472 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 AGTR1P30556 359 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PPIAP62937 165 aaKnown RBP9.5□□□□□ -0.89
VPS52-217ENST00000478934 SNTB1Q13884 538 aaKnown RBP9.5□□□□□ -0.89
VPS52-217ENST00000478934 ENDOGQ14249 297 aaKnown RBP9.5□□□□□ -0.89
VPS52-217ENST00000478934 MEF2DQ14814 521 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PLXDC2Q6UX71 529 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 ACOT7LQ6ZUV0 252 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PGAM5Q96HS1 289 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 ZNF160Q9HCG1 818 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 PILRBQ9UKJ0 227 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 HS3ST3B1Q9Y662 390 aa9.5□□□□□ -0.89
VPS52-217ENST00000478934 H0YIZ8 118 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 STMND1H3BQB6 276 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 COX6A1P12074 109 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 SERPINA2P20848 420 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 FGL1Q08830 312 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 LPAL2Q16609 132 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 CDCP2Q5VXM1 449 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 INO80EQ8NBZ0 244 aaPredicted RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 OR2AE1Q8NHA4 323 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 TMEM59Q9BXS4 323 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 SLC25A32Q9H2D1 315 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 C5orf66Q9H5L9 145 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 LDAHQ9H6V9 325 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 ELL3Q9HB65 397 aaPredicted RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 CHMP1AQ9HD42 196 aaPredicted RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 OR2S2Q9NQN1 319 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 IGKV1D-8A0A087WSZ0 117 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 A0A0J9YW62 118 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 DNASE2O00115 360 aaPredicted RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 TOR1AO14656 332 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 TSPAN9O75954 239 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 HIST1H1DP16402 221 aaKnown RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 CSNK1A1P48729 337 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 H3F3AP84243 136 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 ARFRP1Q13795 201 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 KISS1Q15726 138 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 SNAI3Q3KNW1 292 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 MOB3CQ70IA8 216 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 YRDCQ86U90 279 aaKnown RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 OR51T1Q8NGJ9 327 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 OR51F2Q8NH61 342 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 TMED6Q8WW62 240 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms