RNA–Protein interactions for RNA: ENST00000475076.5

DYSF-215, Transcript of dysferlin, human

TSL 2

Gene DYSF, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYSF-215	ENST00000475076	LINC00346	Q8IVM7	164 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	SPART	Q8N0X7	666 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	SYS1	Q8N2H4	156 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	ZNF283	Q8N7M2	679 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	NANOGP1	Q8N7R0	232 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	OR2Z1	Q8NG97	314 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	OR4M2	Q8NGB6	313 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	OR5L1	Q8NGL2	311 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	OR52N1	Q8NH53	320 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	ZNF418	Q8TF45	676 aa	Predicted RBP	11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	THEM6	Q8WUY1	208 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	RNF133	Q8WVZ7	376 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	ITLN1	Q8WWA0	313 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	TBX5	Q99593	518 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	COQ7	Q99807	217 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	ABHD6	Q9BV23	337 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	DCAF16	Q9NXF7	216 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	IL19	Q9UHD0	177 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	ERGIC3	Q9Y282	383 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	CAB39	Q9Y376	341 aa	Predicted RBP	11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	SVEP1	Q4LDE5	3571 aa		11.2	□□□□□ -0.62
DYSF-215	ENST00000475076	LOC105371242	A0A075B767	164 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	EPHA1	P21709	976 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	GATA3	P23771	443 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	RPS27	P42677	84 aa	Known RBP	11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	ECH1	Q13011	328 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	HNRNPA0	Q13151	305 aa	Known RBP	11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	HLX	Q14774	488 aa	Predicted RBP	11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	ZNF684	Q5T5D7	378 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	CORO6	Q6QEF8	472 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	FBXW12	Q6X9E4	464 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	C1QL2	Q7Z5L3	287 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	KLHL36	Q8N4N3	616 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	SEMA6D	Q8NFY4	1073 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	HAVCR2	Q8TDQ0	301 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	ZFAND2B	Q8WV99	257 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	SLAMF6	Q96DU3	332 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	MAP6	Q96JE9	813 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	OR8B4	Q96RC9	309 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	ALG8	Q9BVK2	526 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	MND1	Q9BWT6	205 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	HDHD2	Q9H0R4	259 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	DDX28	Q9NUL7	540 aa	Known RBP	11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	PTTG3P	Q9NZH4	202 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	CLEC2D	Q9UHP7	191 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	PCDHB10	Q9UN67	800 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	KLHDC2	Q9Y2U9	406 aa		11.19	□□□□□ -0.62
DYSF-215	ENST00000475076	PPIAL4E	A0A075B759	164 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	PPIAL4C	A0A0B4J2A2	164 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	METTL15	A6NJ78	407 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	ZNF878	C9JN71	531 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	PPIAL4D	F5H284	164 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	MYL12B	O14950	172 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	FOXH1	O75593	365 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	KRT8	P05787	483 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	SMIM18	P0DKX4	95 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	PPIAL4F	P0DN26	164 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	DCTD	P32321	178 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	OPRL1	P41146	370 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	LCN2	P80188	198 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	EMX1	Q04741	257 aa	Predicted RBP	11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	TMEM155	Q4W5P6	130 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	OR2T2	Q6IF00	324 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	CFAP77	Q6ZQR2	320 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	USP43	Q70EL4	1123 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	SSX6	Q7RTT6	188 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	LRRC28	Q86X40	367 aa	Predicted RBP	11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	ZNF679	Q8IYX0	411 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	OR5AS1	Q8N127	324 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	SPIC	Q8N5J4	248 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	ZNF485	Q8NCK3	441 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	OR8G5	Q8NG78	346 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	OR10S1	Q8NGN2	331 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	NANP	Q8TBE9	248 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	FCGR1B	Q92637	280 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	OR2V2	Q96R30	315 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	AMELY	Q99218	206 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	MRO	Q9BYG7	248 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	MRPS26	Q9BYN8	205 aa	Known RBP	11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	C7orf69	Q9H7B7	122 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	NIPAL2	Q9H841	368 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	PATZ1	Q9HBE1	687 aa	Known RBP	11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	ACOT13	Q9NPJ3	140 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	PNRC2	Q9NPJ4	139 aa	Known RBP	11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	PPP1R3C	Q9UQK1	317 aa		11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	LSM2	Q9Y333	95 aa	Known RBP	11.18	□□□□□ -0.62
DYSF-215	ENST00000475076	FBN3	Q75N90	2809 aa		11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	PRR32	B1ATL7	298 aa		11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	IFNL4	K9M1U5	179 aa		11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	ZFP36	P26651	326 aa	Known RBP	11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	RBMX	P38159	391 aa	Known RBP	11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	WNT4	P56705	351 aa		11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	HILS1	P60008	231 aa		11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	BTG1	P62324	171 aa		11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	GRB2	P62993	217 aa	Known RBP	11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	MRPL28	Q13084	256 aa	Known RBP	11.17	□□□□□ -0.62
DYSF-215	ENST00000475076	KRTAP27-1	Q3LI81	207 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms