RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ACTG2P63267 376 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 CSNK2BP67870 215 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 CCL8P80075 99 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 ALKBH1Q13686 389 aaKnown RBP5.92□□□□□ -1.46
LIMD1-204ENST00000474665 TIGD6Q17RP2 521 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 NKPD1Q17RQ9 610 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 ODF4Q2M2E3 257 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 GFOD2Q3B7J2 385 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF829Q3KNS6 432 aaPredicted RBP5.92□□□□□ -1.46
LIMD1-204ENST00000474665 DMRTC1Q5HYR2 192 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 BCL2L15Q5TBC7 163 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 UNQ6126/PRO20091Q6UXV3 157 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 MRPL21Q7Z2W9 205 aaKnown RBP5.92□□□□□ -1.46
LIMD1-204ENST00000474665 WDR86Q86TI4 376 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 KLBQ86Z14 1044 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF786Q8N393 782 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 OR10AD1Q8NGE0 317 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 OR51A4Q8NGJ6 313 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 OR14K1Q8NGZ2 314 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 OR52N1Q8NH53 320 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 GATAD2BQ8WXI9 593 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 YIPF5Q969M3 257 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 PERPQ96FX8 193 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 COG8Q96MW5 612 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 OR5M11Q96RB7 305 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 VRK1Q99986 396 aaPredicted RBP5.92□□□□□ -1.46
LIMD1-204ENST00000474665 PDCD1LG2Q9BQ51 273 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 RGCCQ9H4X1 137 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 CXorf56Q9H5V9 222 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 DCAF16Q9NXF7 216 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 EXOSC1Q9Y3B2 195 aaKnown RBP5.92□□□□□ -1.46
LIMD1-204ENST00000474665 CACNG2Q9Y698 323 aa5.92□□□□□ -1.46
LIMD1-204ENST00000474665 A0A096LNT2 108 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 IGHV3-64DA0A0J9YX35 117 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 LOC107986453A0A1B0GWG9 222 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 LOC390937A0A1W2PQ73 354 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 IRGMA1A4Y4 181 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 GGT3PA6NGU5 568 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 A6NIN4 97 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 VSTM5A8MXK1 200 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 F5H5P2 479 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 SPRY3O43610 288 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 RGS10O43665 173 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 RP2O75695 350 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 CST4P01036 141 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 MT-ND5P03915 603 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 ISG15P05161 165 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 CD55P08174 381 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 TACSTD2P09758 323 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 FAHP16930 419 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 CA6P23280 308 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 COL8A2P25067 703 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF81P51508 661 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 EFNA4P52798 201 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 SELENOVP59797 346 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 RPS11P62280 158 aaKnown RBP eCLIP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 HOXA4Q00056 320 aaPredicted RBP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 MALLQ13021 153 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 MAB21L1Q13394 359 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 CDK5R1Q15078 307 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 TSTQ16762 297 aaKnown RBP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 RBM48Q5RL73 367 aaKnown RBP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 TMEM42Q69YG0 159 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 DMKNQ6E0U4 476 aaPredicted RBP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 ASPHD2Q6ICH7 369 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 PRSS48Q7RTY5 328 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 C11orf53Q8IXP5 236 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 LRRC75A-AS1Q8N1F1 130 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 STX19Q8N4C7 294 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 KLHL36Q8N4N3 616 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 ZNF525Q8N782 197 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 ZFP41Q8N8Y5 198 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 OR2Z1Q8NG97 314 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 OR13G1Q8NGZ3 307 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 UBASH3BQ8TF42 649 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 HPSE2Q8WWQ2 592 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 MYDGFQ969H8 173 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 ITPKCQ96DU7 683 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 ADAT3Q96EY9 351 aaPredicted RBP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 FAM71F1Q96KD3 344 aaPredicted RBP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 PGLYRP3Q96LB9 341 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 MS4A5Q9H3V2 200 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 MOB1AQ9H8S9 216 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 SP140LQ9H930 580 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 DYNLRB1Q9NP97 96 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 BABAM2Q9NXR7 383 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 SCN3BQ9NY72 215 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 NKIRAS2Q9NYR9 191 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 MRPL15Q9P015 296 aaKnown RBP5.91□□□□□ -1.46
LIMD1-204ENST00000474665 GTF2A1LQ9UNN4 478 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 TPRKBQ9Y3C4 175 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 PMF1-BGLAPU3KQ54 211 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 V9GYS6 101 aa5.91□□□□□ -1.46
LIMD1-204ENST00000474665 KIAA2026Q5HYC2 2103 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 LOC100289279A0A1B0GTE1 492 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 C3orf80F5H4A9 247 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 DHRS3O75911 302 aa5.9□□□□□ -1.46
LIMD1-204ENST00000474665 PTBP3O95758 552 aaKnown RBP5.9□□□□□ -1.46
LIMD1-204ENST00000474665 MYL12AP19105 171 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms