RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 KCTD12Q96CX2 325 aaKnown RBP8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 CMBLQ96DG6 245 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 ADAT3Q96EY9 351 aaPredicted RBP8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 CHST5Q9GZS9 411 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 SLC22A4Q9H015 551 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 MMP27Q9H306 513 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 GPR173Q9NS66 373 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 NPAP1Q9NZP6 1156 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF319Q9P2F9 582 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 METRNQ9UJH8 293 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 CMAHPQ9Y471 501 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 PEX16Q9Y5Y5 336 aa8.86□□□□□ -0.99
PRPF38A-202ENST00000474048 ZZEF1O43149 2961 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 TRAV8-7A0A075B6U6 113 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 CD300LBA8K4G0 201 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 LMX1BO60663 402 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 CLPXO76031 633 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 NCR1O76036 304 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 IGLV3-1P01715 115 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 EPXP11678 715 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 ATF1P18846 271 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 AZGP1P25311 298 aaKnown RBP8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 CALCRP30988 508 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 GLRXP35754 106 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF93P35789 620 aaPredicted RBP8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 TALDO1P37837 337 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 FABP6P51161 128 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 ATP1B3P54709 279 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 OR8G1Q15617 311 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 NKPD1Q17RQ9 610 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 OR2T2Q6IF00 324 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 LHFPL2Q6ZUX7 228 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 OR5AS1Q8N127 324 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 OR6M1Q8NGM8 313 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 LINC01560Q8TB33 94 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 TRMT10AQ8TBZ6 339 aaKnown RBP8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 KLF14Q8TD94 323 aaPredicted RBP8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 PIGTQ969N2 578 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 ORAI1Q96D31 301 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 PLPPR2Q96GM1 343 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 MICU1Q9BPX6 476 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 RTL8AQ9BWD3 113 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 SMURF1Q9HCE7 757 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 DUSP13Q9UII6 198 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 RNF115Q9Y4L5 304 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 MPC1Q9Y5U8 109 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 POLEQ07864 2286 aa8.85□□□□□ -0.99
PRPF38A-202ENST00000474048 FAM230AA0A1W2PPH8 454 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 ZNF850A8MQ14 1090 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 FAM25AB3EWG3 89 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 FAM25CB3EWG5 89 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 FAM25GB3EWG6 89 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 AIPO00170 330 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 PIN1P1O15428 100 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 C1QL1O75973 258 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 CLEC2LP0C7M8 214 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 HTR2CP28335 458 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 RBP2P50120 134 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 FUT6P51993 359 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 MTCP1P56278 107 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 PRSS12P56730 875 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 PRDX4Q13162 271 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 SPANXN2Q5MJ10 180 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 HES5Q5TA89 166 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 MBNL2Q5VZF2 373 aaKnown RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 AWAT2Q6E213 333 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 ADAM5Q6NVV9 412 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 CDH26Q8IXH8 852 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 NUP37Q8NFH4 326 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 HAVCR1Q96D42 359 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 PIK3IP1Q96FE7 263 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 UQCC2Q9BRT2 126 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 ADAT1Q9BUB4 502 aaKnown RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 METTL17Q9H7H0 456 aaPredicted RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 ELL3Q9HB65 397 aaPredicted RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 PCDHB16Q9NRJ7 776 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 CYSLTR2Q9NS75 346 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 C14orf119Q9NWQ9 140 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 MRPL15Q9P015 296 aaKnown RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 ABRACLQ9P1F3 81 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 COMMD3Q9UBI1 195 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 CGGBP1Q9UFW8 167 aaPredicted RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 STEAP1Q9UHE8 339 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 PURGQ9UJV8 347 aaKnown RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 A3GALT2U3KPV4 340 aa8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 HEATR1Q9H583 2144 aaKnown RBP8.84□□□□□ -0.99
PRPF38A-202ENST00000474048 DIDO1Q9BTC0 2240 aaKnown RBP8.83□□□□□ -1
PRPF38A-202ENST00000474048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.83□□□□□ -1
PRPF38A-202ENST00000474048 C5orf63A6NC05 138 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 TRIM64BA6NI03 449 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 OR5B21A6NL26 309 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 IFITM5A6NNB3 132 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 IQCF6A8MYZ5 107 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 GMDSO60547 372 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 CST4P01036 141 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 ALDOBP05062 364 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 THBDP07204 575 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 UBBP0CG47 229 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 IGFBP3P17936 291 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms