RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 CLDN6P56747 220 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 RPL18AQ02543 176 aaKnown RBP2.05□□□□□ -2.08
PTCD3-209ENST00000472044 TPRG1LQ5T0D9 272 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 OPN5Q6U736 354 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 MRPL21Q7Z2W9 205 aaKnown RBP2.05□□□□□ -2.08
PTCD3-209ENST00000472044 ERO1BQ86YB8 467 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 RAB43Q86YS6 212 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF101Q8IZC7 436 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 KIF2BQ8N4N8 673 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 APCDD1LQ8NCL9 501 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 PROKR2Q8NFJ6 384 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 OR5T1Q8NG75 326 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 ASZ1Q8WWH4 475 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 RERGQ96A58 199 aaPredicted RBP2.05□□□□□ -2.08
PTCD3-209ENST00000472044 FAM19A4Q96LR4 140 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 KCNS3Q9BQ31 491 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 IL22Q9GZX6 179 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 BLZF1Q9H2G9 400 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 ZSCAN16Q9H4T2 348 aaPredicted RBP2.05□□□□□ -2.08
PTCD3-209ENST00000472044 REEP1Q9H902 201 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 RHBDD3Q9Y3P4 386 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 IGHV1-3A0A0C4DH29 117 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 LINC01619G3V211 115 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 TRDMT1O14717 391 aaKnown RBP2.04□□□□□ -2.08
PTCD3-209ENST00000472044 PSPHP1O15172 72 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 PTHP01270 115 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 MSR1P21757 451 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 CCT6AP40227 531 aaKnown RBP2.04□□□□□ -2.08
PTCD3-209ENST00000472044 OR1G1P47890 313 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 UBE2E1P51965 193 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 YWHAEP62258 255 aaKnown RBP2.04□□□□□ -2.08
PTCD3-209ENST00000472044 NAB1Q13506 487 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 OR1Q1Q15612 314 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 HADHQ16836 314 aaKnown RBP2.04□□□□□ -2.08
PTCD3-209ENST00000472044 HIKESHIQ53FT3 197 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 PRR9Q5T870 116 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 DAW1Q8N136 415 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 DRAM1Q8N682 238 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 MIR7-3HGQ8N6C7 128 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF645Q8N7E2 425 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 TMEM105Q8N8V8 129 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 ENKURQ8TC29 256 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 DCAKDQ8WVC6 231 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 GHSRQ92847 366 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 ISOC2Q96AB3 205 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 SMARCD1Q96GM5 515 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 NEURL4Q96JN8 1562 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 RDH12Q96NR8 316 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 SCGB3A2Q96PL1 93 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 ANP32EQ9BTT0 268 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 SFXN3Q9BWM7 321 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 PLEKHF2Q9H8W4 249 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 DDX19BQ9UMR2 479 aa2.04□□□□□ -2.08
PTCD3-209ENST00000472044 LGALS9O00182 355 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 MANBAO00462 879 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 GATBO75879 557 aaKnown RBP2.03□□□□□ -2.08
PTCD3-209ENST00000472044 TGM6O95932 706 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 IGLV2-8P01709 118 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 THRAP10827 490 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 TUBG1P23258 451 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 APLNRP35414 380 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 PEX19P40855 299 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 CCNG1P51959 295 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 ATP6V0D1P61421 351 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 DOC2AQ14183 400 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 MFSD14CQ5VZR4 134 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 TMEM236Q5W0B7 351 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 STEAP4Q687X5 459 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 TTC19Q6DKK2 380 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-209ENST00000472044 OR2T5Q6IEZ7 315 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 ULK3Q6PHR2 472 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 PP632Q6XCG6 107 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 OR2T29Q8NH02 315 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 CERS2Q96G23 380 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 UBE2E2Q96LR5 201 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 IP6K3Q96PC2 410 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 RTBDNQ9BSG5 229 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-209ENST00000472044 NAA50Q9GZZ1 169 aaKnown RBP2.03□□□□□ -2.08
PTCD3-209ENST00000472044 RGCCQ9H4X1 137 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 CHRAC1Q9NRG0 131 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 TUBG2Q9NRH3 451 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 RBFOX1Q9NWB1 397 aaKnown RBP2.03□□□□□ -2.08
PTCD3-209ENST00000472044 CES1P1Q9UKY3 287 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 OR51B2Q9Y5P1 312 aa2.03□□□□□ -2.08
PTCD3-209ENST00000472044 SBNO1A3KN83 1393 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 JCADQ9P266 1359 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 THADAQ6YHU6 1953 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 IGHV3OR16-8A0A075B7F1 116 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 HACD1B0YJ81 288 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 UPK1BO75841 260 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 LHBP01229 141 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 KLK1P06870 262 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 PRKACAP17612 351 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 SRMP19623 302 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 CXCR1P25024 350 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 ERFP50548 548 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 LCN2P80188 198 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 FUT5Q11128 374 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 TSC22D1Q15714 1073 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 SLC35D2Q76EJ3 337 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms