RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 DGCR6LQ9BY27 220 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 OR51V1Q9H2C8 321 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 SP140LQ9H930 580 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 FN3KRPQ9HA64 309 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 KRCC1Q9NPI7 259 aaPredicted RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 C1RLQ9NZP8 487 aa6.66□□□□□ -1.34
USP48-207ENST00000471752 MRPL15Q9P015 296 aaKnown RBP6.66□□□□□ -1.34
USP48-207ENST00000471752 hCG_38984A0A1B0GV85 526 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 hCG_1807616A0A1W2PRN6 198 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 A6NLC8 198 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 ZNF850A8MQ14 1090 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 CLDN34H7C241 214 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 IFNL4K9M1U5 179 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 PHYHO14832 338 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 AKR7A2O43488 359 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 ATP8B1O43520 1251 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 RHBDL1O75783 438 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 TOX4O94842 621 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 FSTL3O95633 263 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 PPIAL4GP0DN37 164 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 IRF2P14316 349 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 EPHA2P29317 976 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 GSTT1P30711 240 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 NAA10P41227 235 aaPredicted RBP6.65□□□□□ -1.34
USP48-207ENST00000471752 KLRD1Q13241 179 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 IKZF1Q13422 519 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 WDR38Q5JTN6 314 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 TEX36Q5VZQ5 186 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 PLBD1Q6P4A8 553 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 SHISA2Q6UWI4 295 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 CPOQ8IVL8 374 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 C1orf87Q8N0U7 546 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 TEX29Q8N6K0 151 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 OR2T33Q8NG76 320 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 OR52L1Q8NGH7 329 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 OR6N2Q8NGY6 317 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 CANT1Q8WVQ1 401 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 ST8SIA4Q92187 359 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 SLC25A28Q96A46 364 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 ITPKCQ96DU7 683 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 AJUBAQ96IF1 538 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 WDFY2Q96P53 400 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 TTTY10Q9BZA0 68 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 ELL3Q9HB65 397 aaPredicted RBP6.65□□□□□ -1.34
USP48-207ENST00000471752 CMC2Q9NRP2 79 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 ERVK-18Q9QC07 812 aa6.65□□□□□ -1.34
USP48-207ENST00000471752 NOTCH3Q9UM47 2321 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 IGHV1-69DA0A0B4J2H0 117 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 SRRM5B3KS81 715 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 RNASEK-C17orf49H0YIS7 233 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 MITFO75030 526 aaPredicted RBP6.64□□□□□ -1.35
USP48-207ENST00000471752 GLCEO94923 617 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 IGHV1-69P01742 117 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 MRPL3P09001 348 aaKnown RBP6.64□□□□□ -1.35
USP48-207ENST00000471752 MTNR1AP48039 350 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 TGM4P49221 684 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 DGUOKQ16854 277 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 CD300LDQ6UXZ3 194 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 NLRC3Q7RTR2 1065 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 VMO1Q7Z5L0 202 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 BATF2Q8N1L9 274 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 SCCPDHQ8NBX0 429 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 LY6G5BQ8NDX9 201 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 GIPC3Q8TF64 312 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 THEM6Q8WUY1 208 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 HPSE2Q8WWQ2 592 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 TNFRSF14Q92956 283 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 ERGIC1Q969X5 290 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 PLEKHA8Q96JA3 519 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 ZNF488Q96MN9 340 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 INTS14Q96SY0 518 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 THTPAQ9BU02 230 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 ZNF696Q9H7X3 374 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 REEP1Q9H902 201 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 SIRT7Q9NRC8 400 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 RPUSD1Q9UJJ7 312 aaKnown RBP6.64□□□□□ -1.35
USP48-207ENST00000471752 COPS3Q9UNS2 423 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 SIGLEC9Q9Y336 463 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
USP48-207ENST00000471752 MEX3AA1L020 520 aaKnown RBP6.63□□□□□ -1.35
USP48-207ENST00000471752 CCDC182A6NF36 153 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 A6NIN4 97 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 RIIAD1A6NNX1 92 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 ZNF878C9JN71 531 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 H3BN98 237 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 ENSAO43768 121 aaKnown RBP6.63□□□□□ -1.35
USP48-207ENST00000471752 DCTN3O75935 186 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 CST1P01037 141 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 SLC2A5P22732 501 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 DCTDP32321 178 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 GRK5P34947 590 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 IER3P46695 156 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 CDK5Q00535 292 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 DEFA6Q01524 100 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 PRDX4Q13162 271 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 TAF9Q16594 264 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 TIGD6Q17RP2 521 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 CEP78Q5JTW2 689 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 HCP5Q6MZN7 132 aa6.63□□□□□ -1.35
USP48-207ENST00000471752 PLEKHG7Q6ZR37 379 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms