RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SNAI3Q3KNW1 292 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 GLYATL3Q5SZD4 288 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 KPRPQ5T749 579 aaPredicted RBP7.49□□□□□ -1.21
CPSF4-211ENST00000471455 RPL13AP3Q6NVV1 102 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 DPY19L4Q7Z388 723 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 CPLX4Q7Z7G2 160 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 SLC15A3Q8IY34 581 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 LNX2Q8N448 690 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 LY6G5BQ8NDX9 201 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 PROKR2Q8NFJ6 384 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 OR52L1Q8NGH7 329 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 OR56B2PQ8NGI1 322 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 OR2T4Q8NH00 348 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 OR4K13Q8NH42 304 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 OR2AE1Q8NHA4 323 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 OR2T6Q8NHC8 308 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 LRRC29Q8WV35 223 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 MISP3Q96FF7 219 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 DNTTIP1Q9H147 329 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 PPA2Q9H2U2 334 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 OR52D1Q9H346 318 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 RANBP3Q9H6Z4 567 aaPredicted RBP7.49□□□□□ -1.21
CPSF4-211ENST00000471455 ABCB9Q9NP78 766 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 PNRC2Q9NPJ4 139 aaKnown RBP7.49□□□□□ -1.21
CPSF4-211ENST00000471455 SIRT7Q9NRC8 400 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 NDUFAF4Q9P032 175 aa7.49□□□□□ -1.21
CPSF4-211ENST00000471455 IGHV3OR15-7A0A075B7D8 119 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 TRBV4-1A0A0J9YWV2 114 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 ANXA2P2A6NMY6 339 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 M0R1W7 72 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 OTX1P32242 354 aaPredicted RBP7.48□□□□□ -1.21
CPSF4-211ENST00000471455 GSK3BP49841 420 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 UBE2E1P51965 193 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 FXYD6P3P58550 94 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 GRB2P62993 217 aaKnown RBP7.48□□□□□ -1.21
CPSF4-211ENST00000471455 FAM189A2Q15884 450 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 PCK2Q16822 640 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 TIGD6Q17RP2 521 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 WDR38Q5JTN6 314 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 C1orf122Q6ZSJ8 110 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 ZNF826PQ6ZT77 177 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 ZDHHC21Q8IVQ6 265 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 MRPL41Q8IXM3 137 aaKnown RBP7.48□□□□□ -1.21
CPSF4-211ENST00000471455 SDR9C7Q8NEX9 313 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 OR4S1Q8NGB4 309 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 H1FXQ92522 213 aaKnown RBP7.48□□□□□ -1.21
CPSF4-211ENST00000471455 MCUR1Q96AQ8 359 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 MAP6Q96JE9 813 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 CLPTM1LQ96KA5 538 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 DHRS1Q96LJ7 313 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 CCL13Q99616 98 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 KCNJ15Q99712 375 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 MICU1Q9BPX6 476 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 DCTN5Q9BTE1 182 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 RSRP1Q9BUV0 290 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 METTL8Q9H825 291 aaKnown RBP7.48□□□□□ -1.21
CPSF4-211ENST00000471455 EFCAB1Q9HAE3 211 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 DNAJB11Q9UBS4 358 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 CD300AQ9UGN4 299 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 NOTCH3Q9UM47 2321 aa7.48□□□□□ -1.21
CPSF4-211ENST00000471455 A0A1W2PQ09 198 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 OR6C68A6NDL8 312 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 ZNF878C9JN71 531 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 G3V4G9 280 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 NME4O00746 187 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 TBX1O43435 398 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 GADD45GO95257 159 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SPARCP09486 303 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SAA4P35542 130 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 BLVRAP53004 296 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 HOXA4Q00056 320 aaPredicted RBP7.47□□□□□ -1.21
CPSF4-211ENST00000471455 IL5RAQ01344 420 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SPIBQ01892 262 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.47□□□□□ -1.21
CPSF4-211ENST00000471455 IKZF1Q13422 519 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SEC23BQ15437 767 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 AANATQ16613 207 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 HIST2H2BDQ6DRA6 164 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SLC35E4Q6ICL7 350 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 HACD2Q6Y1H2 254 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 DCXRQ7Z4W1 244 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 NAA40Q86UY6 237 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 FAM216BQ8N7L0 139 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 FAM86B1Q8N7N1 296 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 CYB561A3Q8NBI2 242 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 PAPD5Q8NDF8 572 aaKnown RBP7.47□□□□□ -1.21
CPSF4-211ENST00000471455 BEND2Q8NDZ0 799 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 CSNK2A3Q8NEV1 391 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 OR1M1Q8NGA1 313 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 OR52H1Q8NGJ2 320 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 OR51G2Q8NGK0 314 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 OR5D13Q8NGL4 314 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 OR9Q1Q8NGQ5 310 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 OR52J3Q8NH60 311 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 C8orf46Q8TAG6 207 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SPSB4Q96A44 273 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 MED30Q96HR3 178 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 RTL8AQ9BWD3 113 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 NPFFR1Q9GZQ6 430 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SEMA6AQ9H2E6 1030 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms