RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FLOT1O75955 427 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CPSF4O95639 269 aaKnown RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CST1P01037 141 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 IGHV1-46P01743 117 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 DESP17661 470 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 TNNI1P19237 187 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 HLA-DMAP28067 261 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 BMI1P35226 326 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 GBX2P52951 348 aaPredicted RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ACLYP53396 1101 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 EIF3EP60228 445 aaKnown RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 RPL23AP62750 156 aaKnown RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 IL5RAQ01344 420 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CHIT1Q13231 466 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ART3Q13508 389 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 PSMD5Q16401 504 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF181Q2M3W8 571 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 KRTAP25-1Q3LHN0 102 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 LRRC23Q53EV4 343 aaPredicted RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 LIN9Q5TKA1 542 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 RNASEKQ6P5S7 137 aaKnown RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 OPN5Q6U736 354 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 C12orf54Q6X4T0 127 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 RUFY3Q7L099 469 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 MDP1Q86V88 176 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 BBS7Q8IWZ6 715 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 IQCKQ8N0W5 287 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 OR6Q1Q8NGQ2 317 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 RXFP4Q8TDU9 374 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CDS1Q92903 461 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 OTUB2Q96DC9 234 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 NRBF2Q96F24 287 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 OR4K3Q96R72 315 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 KCNS3Q9BQ31 491 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 GCOM2Q9BZD3 368 aaPredicted RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ILKAPQ9H0C8 392 aaPredicted RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 TOLLIPQ9H0E2 274 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 RACGAP1Q9H0H5 632 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 OR51M1Q9H341 326 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF442Q9H7R0 627 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 PLEKHF2Q9H8W4 249 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF302Q9NR11 478 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 RGS18Q9NS28 235 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 UXTQ9UBK9 157 aaPredicted RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CLN8Q9UBY8 286 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 HMGXB4Q9UGU5 601 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ISY1Q9ULR0 285 aaKnown RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CSDC2Q9Y534 153 aaKnown RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 HES2Q9Y543 173 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 COMMD3-BMI1R4GMX3 469 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 KANK1Q14678 1352 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 ACANP16112 2415 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CDK12Q9NYV4 1490 aaPredicted RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 VWDEQ8N2E2 1590 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 FAT4Q6V0I7 4981 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 CACNA1HO95180 2353 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 STAB2Q8WWQ8 2551 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 DSPP15924 2871 aaKnown RBP0.39□□□□□ -2.35
UBXN4-207ENST00000471246 EP400Q96L91 3159 aa0.39□□□□□ -2.35
UBXN4-207ENST00000471246 AKNAQ7Z591 1439 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 TOP2BQ02880 1626 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 NHSL1Q5SYE7 1610 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 DMBT1Q9UGM3 2413 aaPredicted RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 CENPEQ02224 2701 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 NBASA2RRP1 2371 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 KMT2EQ8IZD2 1858 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 ADAMTS7Q9UKP4 1686 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 EIF4G1Q04637 1599 aaKnown RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 ERCC6Q03468 1493 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 BAZ1BQ9UIG0 1483 aaKnown RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 FAM240BA0A1B0GVZ2 78 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 A6NDN8 102 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 SMCO2A6NFE2 343 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 A8MWL6 223 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 GABRPO00591 440 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 NDC80O14777 642 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 AIM2O14862 343 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF73O43830 326 aaPredicted RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 CLDN11O75508 207 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 SCO1O75880 301 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 TGM6O95932 706 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 NRASP01111 189 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 HRASP01112 189 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 KRASP01116 189 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 IGHG2P01859 326 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 CSNK2A2P19784 350 aaPredicted RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 HTR1DP28221 377 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 MPIP34949 423 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 SLC1A1P43005 524 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 TNNT2P45379 298 aaPredicted RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 RAB9AP51151 201 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 KLF3P57682 345 aaPredicted RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 DEFB103AP81534 67 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 IFITM3Q01628 133 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 SEMG2Q02383 582 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 LIPEQ05469 1076 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 BST1Q10588 318 aa0.38□□□□□ -2.35
UBXN4-207ENST00000471246 DDX39BQ13838 428 aaKnown RBP0.38□□□□□ -2.35
UBXN4-207ENST00000471246 ZNF829Q3KNS6 432 aaPredicted RBP0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms